CX288843

Overview
NameCX288843
Unique NameCX288843
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length619
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: APRR1_ARATH (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana GN=APRR1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 2 
Query:  128 QREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPS---DANSGKDTASNGHTSEDNSSD 331
            +RE AL KFR+KR +RCF K++RY +RK+LAE+RPRV+GQFVR++     D N   D+A      E+   +
Sbjct:  532 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQPDSADYDDEEEEEEEE 602
The following BLAST results are available for this feature:
BLAST of CX288843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
APRR1_ARATH7.848e-1247.89Two-component response regulator-like APRR1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC02006A08SK IF1 Citrus clementina cDNA clone C02006A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288843 ID=CX288843; Name=CX288843; organism=Citrus clementina; type=EST; length=619bp
GCACGAGGCTGCCTTGAATGCTGGAGTAACAAATTTGGACAGTGACAATG
GGGCAGCAGGAAATAGTGGAGTTGGTGGCATAACTGAAAGAATCAGTGGA
AATGTGGTAGATGAAGTTTGGGTTGCTCAAAGAGAAGCTGCCTTGACTAA
ATTTCGCCAGAAAAGGAAAGAAAGGTGTTTCGGGAAGAGGGTTCGATATC
AAAGCCGGAAAAAATTGGCAGAACAAAGGCCACGTGTCAGGGGACAGTTT
GTTCGACAACTACCGTCAGATGCCAATTCAGGAAAAGATACCGCAAGCAA
CGGCCATACCTCTGAAGACAATTCTAGTGACAATCTAAGATAACATTGTG
GCAGTGCGGCAGATTTTTAAAATCAACCGTTAGTCCCTGATAGATCATGT
GAATTTGTGTACATTAGATTAGCATTAACTGTTCATGGTGGGAATGGGTT
GTCTTAAATTCTTAATTTGGGACTGGGTTGGAGATATTTTGTAGGCGCAT
TTGATCAATTTGAAACGAATTTTACGGAACCATGGTTCTGCCTTGATGGT
TGTAAACTTTTATGAACTCACTTAAGAGTTTCTTGAATGGATTAAACTCT
AAAAGCGTAAACAATAAAT
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