CX288844

Overview
NameCX288844
Unique NameCX288844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length460
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAAM (Argininosuccinate lyase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=argH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 
Query:    2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376
            KE  FD+V TI G L +     Q +T N ER+ + +   + +AT LADYLV K IPFRT+H+IVGK V  C+ +   L D+ L   +  +   D D+Y+YL  EN +++  S+GSTG + V +QL
Sbjct:  326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
[Close]
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAAE (Argininosuccinate lyase OS=Staphylococcus aureus (strain Newman) GN=argH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 
Query:    2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376
            KE  FD+V TI G L +     Q +T N ER+ + +   + +AT LADYLV K IPFRT+H+IVGK V  C+ +   L D+ L   +  +   D D+Y+YL  EN +++  S+GSTG + V +QL
Sbjct:  326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
[Close]
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAAC (Argininosuccinate lyase OS=Staphylococcus aureus (strain COL) GN=argH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 
Query:    2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376
            KE  FD+V TI G L +     Q +T N ER+ + +   + +AT LADYLV K IPFRT+H+IVGK V  C+ +   L D+ L   +  +   D D+Y+YL  EN +++  S+GSTG + V +QL
Sbjct:  326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
[Close]
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAAB (Argininosuccinate lyase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=argH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 
Query:    2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376
            KE  FD+V TI G L +     Q +T N ER+ + +   + +AT LADYLV K IPFRT+H+IVGK V  C+ +   L D+ L   +  +   D D+Y+YL  EN +++  S+GSTG + V +QL
Sbjct:  326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVIQQL 450
[Close]
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAA9 (Argininosuccinate lyase OS=Staphylococcus aureus (strain JH9) GN=argH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 
Query:    2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376
            KE  FD+V TI G L +     Q +T N ER+ + +   + +AT LADYLV K IPFRT+H+IVGK V  C+ +   L D+ L   +  +   D D+Y+YL  EN +++  S+GSTG + V +QL
Sbjct:  326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
[Close]
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAA8 (Argininosuccinate lyase OS=Staphylococcus aureus (strain NCTC 8325) GN=argH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 
Query:    2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376
            KE  FD+V TI G L +     Q +T N ER+ + +   + +AT LADYLV K IPFRT+H+IVGK V  C+ +   L D+ L   +  +   D D+Y+YL  EN +++  S+GSTG + V +QL
Sbjct:  326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
[Close]
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAA3 (Argininosuccinate lyase OS=Staphylococcus aureus (strain USA300) GN=argH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 
Query:    2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376
            KE  FD+V TI G L +     Q +T N ER+ + +   + +AT LADYLV K IPFRT+H+IVGK V  C+ +   L D+ L   +  +   D D+Y+YL  EN +++  S+GSTG + V +QL
Sbjct:  326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
[Close]
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAA2 (Argininosuccinate lyase OS=Staphylococcus aureus (strain JH1) GN=argH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 
Query:    2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376
            KE  FD+V TI G L +     Q +T N ER+ + +   + +AT LADYLV K IPFRT+H+IVGK V  C+ +   L D+ L   +  +   D D+Y+YL  EN +++  S+GSTG + V +QL
Sbjct:  326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
[Close]
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAA1 (Argininosuccinate lyase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=argH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 
Query:    2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376
            KE  FD+V TI G L +     Q +T N ER+ + +   + +AT LADYLV K IPFRT+H+IVGK V  C+ +   L D+ L   +  +   D D+Y+YL  EN +++  S+GSTG + V +QL
Sbjct:  326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
[Close]
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_GEOSW (Argininosuccinate lyase OS=Geobacillus sp. (strain WCH70) GN=argH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.179e-22
Identity = 52/125 (41.60%), Postives = 79/125 (63.20%), Query Frame = 2 
Query:    2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376
            KE  FD+VKT+ G L++ A   + +  NV+ ++KA    + +AT LADYL NK +PFR +H+IVGK V +C+ K   L DL LD  +  +P+F++D+YE L    A+ + +S G TG + V + L
Sbjct:  325 KEGMFDTVKTVTGSLKIFAGMIKTMKVNVDVMEKATKQDFSNATELADYLANKGVPFREAHEIVGKLVLICIEKGVFLADLPLDVYKEASPLFEEDIYEALKPYTAVNRRNSAGGTGFSEVRKAL 449
The following BLAST results are available for this feature:
BLAST of CX288844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARLY_STAAM2.450e-2242.40Argininosuccinate lyase OS=Staphylococcus aureus (... [more]
ARLY_STAAE2.450e-2242.40Argininosuccinate lyase OS=Staphylococcus aureus (... [more]
ARLY_STAAC2.450e-2242.40Argininosuccinate lyase OS=Staphylococcus aureus (... [more]
ARLY_STAAB2.450e-2242.40Argininosuccinate lyase OS=Staphylococcus aureus (... [more]
ARLY_STAA92.450e-2242.40Argininosuccinate lyase OS=Staphylococcus aureus (... [more]
ARLY_STAA82.450e-2242.40Argininosuccinate lyase OS=Staphylococcus aureus (... [more]
ARLY_STAA32.450e-2242.40Argininosuccinate lyase OS=Staphylococcus aureus (... [more]
ARLY_STAA22.450e-2242.40Argininosuccinate lyase OS=Staphylococcus aureus (... [more]
ARLY_STAA12.450e-2242.40Argininosuccinate lyase OS=Staphylococcus aureus (... [more]
ARLY_GEOSW4.179e-2241.60Argininosuccinate lyase OS=Geobacillus sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionC02006A09SK IF1 Citrus clementina cDNA clone C02006A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288844 ID=CX288844; Name=CX288844; organism=Citrus clementina; type=EST; length=460bp
TAAAGAACCTACATTTGACAGCGTTAAGACAATTGTTGGAATGCTTGAAG
TTTCAGCAGAGTTTGCACAGAACATTACATTTAATGTGGAGAGAATAAAG
AAGGCTTTGCCAGCTGGTTATCTTGATGCCACAACCCTTGCCGATTATCT
TGTGAATAAGCAAATACCTTTTAGGACTTCCCATGATATAGTAGGAAAAG
CAGTTGCTTTGTGCGTGTCAAAGGAATGTCAGCTTCAGGATCTGAGTCTT
GATGAGATGAGAAGTCTAAACCCAGTGTTTGATAAGGATGTATACGAATA
TCTCGGAGTAGAAAATGCAATAAGGAAATTCAGCTCATTTGGTTCCACAG
GATCGGCATGCGTCACTGAACAACTACATTCTTGGGTTGCCAAGCTTGGA
ATCAACAGAAGTAGCTGTTAATTTACAAATGGAAGCAGAGATGAGTAAAA
TGAGATCAAG
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