CX288844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAEQ (Argininosuccinate lyase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=argH PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.538e-21 Identity = 53/137 (38.69%), Postives = 79/137 (57.66%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRS 412 KE FD+V T+ G L + ++ N R+ + + + +AT LADYLV+K +PFRT+H+IVGK V C+ K L D+ L E + + ++D+Y+YL EN +++ S+GSTG V QL A L N S Sbjct: 326 KEGLFDAVHTLKGSLRIFEGMVASMKVNSNRLSQTVKNDFSNATELADYLVSKSVPFRTAHEIVGKIVLNCIHKGIYLLDVPLSEYQEHHENIEEDIYDYLTPENCLKRRQSYGSTGQESVKHQLKVAKALLKDNES 462
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_DESAD (Argininosuccinate lyase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=argH PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.538e-21 Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQ---LHSWVAK 394 KEP FD KT+ + + A+ + FN ++ AL G+L+AT LADYLV K IPFR +H I G AVA ++ L+D+SL+E+++ + ++DV+E L E A+R+ S GSTG V Q L +W+ K Sbjct: 327 KEPFFDCDKTVHASVVIMADMMDAMGFNPANMESALKKGFLNATELADYLVGKGIPFREAHHITGSAVAKAEAESRGLEDMSLEELKTFSDKIEEDVFEVLSYEAAVRRRVSPGSTGPESVDSQIAELKAWLKK 460
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_PROM4 (Argininosuccinate lyase OS=Prochlorococcus marinus (strain MIT 9211) GN=argH PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 4.621e-21 Identity = 49/129 (37.98%), Postives = 84/129 (65.12%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLE-VSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSW 385 KE FD+V T+ L+ +S + + F+++R+ A+ + + +AT +ADYLV+K++PFR ++ IVG+ V LC+ + L+DLS D+ + ++P FD+D+Y+ L E+ + S G TG A V+ QL +W Sbjct: 325 KEALFDTVVTVRNSLQAMSILLEEGLEFSLDRLGSAVESDFSNATDVADYLVSKEVPFREAYQIVGRLVKLCMKEGILLKDLSFDQWQDMHPAFDQDIYKRLTPEHVVASRISQGGTGFAQVSAQLENW 453
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_CARHZ (Argininosuccinate lyase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=argH PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 4.621e-21 Identity = 52/125 (41.60%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KEP FD+V T+ G L V + I FN + KA G+L+AT LA+YLV K +PFR +H I G+ V +L +LSLDE++ ++P+ ++D+YE L +EN + K FG V EQL Sbjct: 324 KEPLFDTVDTLKGSLRVFTGMLKTIKFNQGAMYKAALKGFLNATDLAEYLVEKGVPFREAHRITGELVLKAEKTGRELLELSLDELKEMSPLIEEDIYEKLKIENVLAKRKLFGGPAPQAVIEQL 448
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_BACC2 (Argininosuccinate lyase OS=Bacillus cereus (strain G9842) GN=argH PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 6.035e-21 Identity = 47/117 (40.17%), Postives = 75/117 (64.10%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTG 352 KE FD+VKT+ G L + A + +T N E++ +A+ + +AT +ADYL NK +PFR +H+IVGK V C K L D+ L+ + ++P+F++D+YE L A+++ +S G TG Sbjct: 325 KEGMFDTVKTVEGCLHIMAGMLETMTVNKEKMGQAVTQDFSNATEIADYLANKGLPFRQAHEIVGKLVLHCTQKGIYLLDVPLETYKEMSPLFEEDLYEVLSPYEAVKRRNSAGGTG 441
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STACT (Argininosuccinate lyase OS=Staphylococcus carnosus (strain TM300) GN=argH PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 7.882e-21 Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KE FD+V T+ G L + ++T N +R+ + + + +AT LADYLV K +PFR +H IVG+ V C+ +C L D+ L++ + + D +Y YL EN +++ S+GSTG V Q+ Sbjct: 326 KEGLFDAVHTVTGSLRIFEGMLASLTVNTDRLNETVHQDFSNATELADYLVEKDVPFREAHAIVGQIVYWCIQHDCYLLDVPLEKYQEFSSSIDDTIYSYLKPENCLKRRKSYGSTGQESVRHQI 450
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_DESVV (Argininosuccinate lyase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=argH PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.029e-20 Identity = 54/134 (40.30%), Postives = 78/134 (58.21%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQ---LHSWVAK 394 KEP D+ +T+ LE+ A + + FN R++ AL +G+L+AT LADYLV K IPFR +H + G AVAL K L++L L++ R + D+DVY L E A+ + + G TG V Q L SW+ + Sbjct: 327 KEPFIDADRTVSASLEIMAGMLREVRFNTARMRTALRSGFLNATELADYLVGKGIPFREAHHLTGAAVALAEEKGVTLEELPLEDYRGICDRIDEDVYPILEPEAAVSRRETPGGTGPRSVAAQIAELDSWLGR 460
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_DESVH (Argininosuccinate lyase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=argH PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.029e-20 Identity = 54/134 (40.30%), Postives = 78/134 (58.21%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQ---LHSWVAK 394 KEP D+ +T+ LE+ A + + FN R++ AL +G+L+AT LADYLV K IPFR +H + G AVAL K L++L L++ R + D+DVY L E A+ + + G TG V Q L SW+ + Sbjct: 327 KEPFIDADRTVSASLEIMAGMLREVRFNTARMRTALRSGFLNATELADYLVGKGIPFREAHHLTGAAVALAEEKGVTLEELPLEDYRGICDRIDEDVYPILEPEAAVSRRETPGGTGPRSVAAQIAELDSWLGR 460
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_CLOPH (Argininosuccinate lyase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=argH PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.029e-20 Identity = 46/137 (33.58%), Postives = 79/137 (57.66%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRS 412 KE TFD++ T+ G L + + + FN + +K + G+ +AT ADYLVN + FR +H I+G V C+ K C ++DLSL E+++++PVF +D+Y+ + ++ + K ++ G G + E + L N S Sbjct: 324 KELTFDAIDTVKGCLSLFTGMIRTMKFNRDTMKASAVLGFTNATDAADYLVNHGVAFRDAHGIIGHLVLTCIEKNCSIEDLSLTELQAISPVFKEDIYDAISLKTCVEKRNTIGGPGVDAMNEVIKECAKYLENNPS 460
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_BACCN (Argininosuccinate lyase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=argH PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.344e-20 Identity = 48/125 (38.40%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KE FD+VKT+ G L + A + +T N E + +A+ + +AT +ADYL NK +PFR +H+IVGK V C K L D+ L+ + ++P+F++D+YE L A+++ +S G TG + + L Sbjct: 325 KEGMFDTVKTVEGCLHIMAGMLETMTVNKENMGQAVTQDFSNATEVADYLANKGLPFRQAHEIVGKLVLHCTKKGIYLLDVPLETYKEMSPLFEEDLYEVLSPYAAVKRRNSAGGTGFVQIEQAL 449 The following BLAST results are available for this feature:
BLAST of CX288844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288844 ID=CX288844; Name=CX288844; organism=Citrus clementina; type=EST; length=460bpback to top |