CX288844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STRCL (Argininosuccinate lyase OS=Streptomyces clavuligerus GN=argH PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.348e-12 Identity = 41/141 (29.08%), Postives = 68/141 (48.23%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL----------HSWVAK 394 KEP FDS + +L +T + ER+++ PAG+ AT +A++LV + +PFR +HD+ G V C S +L L+ ++ +++ +V L V A+ G T + V QL H+W A+ Sbjct: 331 KEPVFDSCDQLEVLLPAFTGMVATLTVHRERMEELAPAGFSLATDIAEWLVRQGVPFRVAHDVAGACVKECESAGIELHQLTDEQFAAISEHLTPEVRSVLTVRGALASRDGRGGTAPSAVAVQLAEVKADLAVQHAWAAR 471
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_SALSV (Argininosuccinate lyase OS=Salmonella schwarzengrund (strain CVM19633) GN=argH PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.348e-12 Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI 403 KE FD++ T + L ++A I R + A GY +AT LADYLV K +PFR +H IVG+AV + + L+ L L +++ + V DVY L +++ + K ++ G V + + A+L + Sbjct: 325 KEGLFDALDTWLDCLHMAALVLDGIQVKRLRCQDAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEALPLADLQKFSRVIGDDVYPILSLQSCLDKRAAKGGVSPQQVAQAIDDARARLAL 458
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_PSEU2 (Argininosuccinate lyase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=argH PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.348e-12 Identity = 40/116 (34.48%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGST 349 KEP FD+ T+ L A+ I +++A G+ AT LADYLV + +PFR H+IVG AV V L ++SL+E+R + ++DV+ L +E ++ + G T Sbjct: 330 KEPLFDAADTLRDSLRAFADMIPAIKPRHAMMREAALRGFSTATDLADYLVRRGLPFRDCHEIVGHAVKYGVETGKDLAEMSLEELRQFSNQIEQDVFAVLTLEGSVNARNHIGGT 445
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_PSESM (Argininosuccinate lyase OS=Pseudomonas syringae pv. tomato GN=argH PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.348e-12 Identity = 44/131 (33.59%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAK 394 KEP FD+ T+ L A+ I +++A G+ AT LADYLV + +PFR H+IVG AV V L ++SL+E+R + ++DV+ L +E ++ + G T EQ+ + VA+ Sbjct: 330 KEPLFDAADTLRDSLRAFADMIPAIKPRHAIMREAALRGFSTATDLADYLVRRGLPFRDCHEIVGHAVKYGVETGKDLAEMSLEELRQFSNQIEQDVFAVLTLEGSVNARNHVGGT----APEQVRAAVAR 456
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_BRAJA (Argininosuccinate lyase OS=Bradyrhizobium japonicum GN=argH PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.348e-12 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 92 RIKKALPAGYLDATTLADYLVNK-QIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKL 397 ++K A GY AT LAD+LV ++PFR +H + G+ VA L +L L EM+++ P KDV L VE++++ +SFG T V Q SW +L Sbjct: 356 KMKAAAGEGYATATDLADWLVRTLKMPFREAHHVTGRIVAKAAEGGVALHELPLKEMQAIEPRITKDVLGVLSVESSVKSRTSFGGTAPKNVASQAKSWAKRL 458
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY1_PSEPF (Argininosuccinate lyase 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=argH1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.348e-12 Identity = 40/125 (32.00%), Postives = 65/125 (52.00%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 K DSV T++ +L A +T NVE +++ P G+ AT +AD+L + +PF+ +H+I G V C + +L + S + ++P DV + L +E AI S +G T V EQ+ Sbjct: 329 KNGVLDSVDTLLLVLPAMAGMVATMTVNVEELRRQAPLGFTLATEVADWLAVRGVPFKEAHEITGALVQACEKHDLELWEASPALLAEIDPRLTADVRDSLTLEAAIAARSGWGGTAPQQVREQI 453
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_NOVAD (Argininosuccinate lyase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=argH PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.760e-12 Identity = 42/139 (30.22%), Postives = 69/139 (49.64%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNK-QIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRSS 415 K P F++ + + F +R++ A GY AT LAD+LV + IPFR +H I G AV L S+ L LS++++++++ D+ VY L VE ++ S G T V +++ LG+ S+ Sbjct: 331 KPPVFEAASLLALSIAAMTGMVAEAKFRTDRMRAAAELGYATATDLADWLVRQANIPFREAHHITGSAVKLAESRGIALDQLSIEDLKAIDERIDERVYAALSVEASVAARCSHGGTAPDEVRKRVAQARVALGLEESA 469
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_SACDO (Argininosuccinate lyase OS=Saccharomyces douglasii GN=ARG4 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.299e-12 Identity = 40/133 (30.08%), Postives = 75/133 (56.39%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQ-LQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKL 397 KEP FD + T+ + ++ +T N ++++ AL L AT LADYLV K +PFR +H I G+ VA + + L+L++ + ++ F +D++E E ++ + ++ G T + V +QL++ ++L Sbjct: 331 KEPLFDCLTTVEHSMLIATGVISTLTVNKDKMEAALTMDML-ATDLADYLVRKGVPFRETHHISGECVATAENLGLSGIDKLTLEQYQKIDSRFAEDLFETFNFEQSVERRNATGGTAKSAVLKQLNNLKSQL 462
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_PSE14 (Argininosuccinate lyase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=argH PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.299e-12 Identity = 40/116 (34.48%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGST 349 KEP FD+ T+ L A+ I +++A G+ AT LADYLV + +PFR H+IVG AV V L ++SL+E+R + ++DV+ L +E ++ + G T Sbjct: 330 KEPLFDAADTLRDSLRAFADMIPAIKPRHAIMREAALRGFSTATDLADYLVRRGLPFRDCHEIVGHAVKYGVETGKDLAEMSLEELRQFSNQIEQDVFAVLTLEGSVNARNHIGGT 445
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_KINRD (Argininosuccinate lyase OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=argH PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.299e-12 Identity = 39/133 (29.32%), Postives = 67/133 (50.38%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKE------CQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHS 382 KEP FD+V T+ +L A + F+ +R+ P G+ AT +A++LV + +PFR +H I G V C + +L DL+++++ +++P V + L E ++ G T V EQL + Sbjct: 335 KEPVFDAVDTLEVLLPAVAGMVATLHFHTDRMASLAPQGFALATDIAEWLVRRGVPFRDAHRISGACVRRCEERAIAEGRGVELWDLTVEDLAAISPHLAPAVRDVLSTEGSLSSRDGIGGTAPVRVAEQLEA 467 The following BLAST results are available for this feature:
BLAST of CX288844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288844 ID=CX288844; Name=CX288844; organism=Citrus clementina; type=EST; length=460bpback to top |