CX288851
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288851 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.713e-32 Identity = 67/94 (71.28%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 1 EGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 282 EGYRI +FDPLGLA+ P+ FAELKVKELKNGRLAMFSMFGFFV AIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK Sbjct: 135 EGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228
BLAST of CX288851 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.461e-32 Identity = 67/94 (71.28%), Postives = 71/94 (75.53%), Query Frame = 1 Query: 1 EGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 282 EGYRI +FDPLGLADDP+ AELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYAT PGK Sbjct: 163 EGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPGK 256
BLAST of CX288851 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 9.745e-32 Identity = 66/93 (70.97%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 1 EGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 279 EGYR+ +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYA PG Sbjct: 175 EGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267
BLAST of CX288851 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 9.745e-32 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 1 Query: 64 AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 282 +FDPLGLA DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 194 SFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of CX288851 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.662e-31 Identity = 64/94 (68.09%), Postives = 72/94 (76.60%), Query Frame = 1 Query: 1 EGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 282 EGYR+ +FDPLGLA+DP+ FAELKVKE KNGRLAMFSMFGFF+QAIVTGKGP+ENL DH+ DPV NNAW+YATNFVP K Sbjct: 174 EGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVPRK 267
BLAST of CX288851 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.249e-31 Identity = 66/94 (70.21%), Postives = 71/94 (75.53%), Query Frame = 1 Query: 1 EGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 282 EGYRI +FDPLGLA+ P FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+E+L DHIADPV NNAW ATNFVPGK Sbjct: 173 EGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266
BLAST of CX288851 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.400e-30 Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 1 Query: 67 FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 279 FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG Sbjct: 194 FDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
BLAST of CX288851 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.135e-30 Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 1 Query: 67 FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 279 FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ DPVANNAW +AT F PG Sbjct: 197 FDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPG 267
BLAST of CX288851 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.121e-30 Identity = 60/73 (82.19%), Postives = 66/73 (90.41%), Query Frame = 1 Query: 64 AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 282 +FDPL DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 52 SFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 124
BLAST of CX288851 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.912e-29 Identity = 62/92 (67.39%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 1 EGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 276 EGYR+ AFDPLGLADDPD FAELKVKE+KNGRLAMF+ GFFVQAIVTGKGPIENL DH+A+P NNA+AYAT F P Sbjct: 181 EGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272 The following BLAST results are available for this feature:
BLAST of CX288851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288851 ID=CX288851; Name=CX288851; organism=Citrus clementina; type=EST; length=566bpback to top |