CX288860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP393_ARATH (Pentatricopeptide repeat-containing protein At5g18950 OS=Arabidopsis thaliana GN=At5g18950 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17 Identity = 50/180 (27.78%), Postives = 93/180 (51.67%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDL 548 EA + + +KG P+ V+Y T+ + + L+ +M + G P+ F YN++I + G+++ + E+ + ++S N++I +G DEA FK M E G +P+ +TY+ LI+ F K +KVE +L+ ++ A G P+ + Y L+ L+ S A +++L Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480 HSP 2 Score: 81.6481 bits (200), Expect = 3.128e-15 Identity = 45/179 (25.14%), Postives = 85/179 (47.49%), Query Frame = 3 Query: 54 PNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSI 590 P+ +Y + L K+ + +++ +K G +PD Y +I F G + A K++ E+ +P+ +YN +I+ K G + + EM G+ +++ +T+I+ F K + A +F M G +PN +TYN L+ + + + + LY +LK GL P + Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGM 459 HSP 3 Score: 75.8702 bits (185), Expect = 1.716e-13 Identity = 44/196 (22.45%), Postives = 95/196 (48.47%), Query Frame = 3 Query: 6 AEAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 +E +LL + ++G+DP +Y + S ++ + + ++ M P ++ Y +I K EA +F+ L++ PD + Y ++I + G L A + EM +KG P+ Y+ +I K ++ + +++ML G +++ N ++ G++ EA +++ + + G+TP++IT Sbjct: 230 SEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAIT 425
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP368_ARATH (Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Arabidopsis thaliana GN=At5g08310 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17 Identity = 52/193 (26.94%), Postives = 99/193 (51.30%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDS 587 +A LD + +G + V L K + + +L++ + +G PDV Y++LI + +A + EA +F E+ + KP + +YNS+I+ K G +D M E +PDV+TY++LI + + A +++M + C PN +T+ L+ L + G + EA+ + +++++ + PDS Sbjct: 562 DACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDS 754 HSP 2 Score: 85.8853 bits (211), Expect = 1.658e-16 Identity = 52/167 (31.14%), Postives = 86/167 (51.50%), Query Frame = 3 Query: 3 TAEAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILL 503 T EA L +++ KG+ P YN++ K +I +M +D +PDV TY LI +G+ +EAI + E++ +C P+ I++ +LI L K G EA + F+EM+EK PD Y +L+ F ++ + +F +M+ +G P V N +L Sbjct: 630 TMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796 HSP 3 Score: 79.337 bits (194), Expect = 1.552e-14 Identity = 46/195 (23.59%), Postives = 91/195 (46.67%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 E++ LL ++ + G++P+ N ++ L + DL +KM+ G P + L+ G+ +A K +++ +++ + I+ L KN +D F+++ G PDV+ Y LI+ K + A LF++M+++G P + TYN ++D + G + ++ + PD IT Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVIT 686 HSP 4 Score: 72.4034 bits (176), Expect = 1.897e-12 Identity = 49/213 (23.00%), Postives = 95/213 (44.60%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQ------------------EKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 +A L +K+ G++ + +Y+ + L K K + LY ++K+ G PD L+ SF +++ +V + + + K ++ Y SL +N + EA+ + + K PD + S +I C K +KV+MA L ++ G P + YN +++ + + GR+ E++ L ++K G+ P T Sbjct: 301 KAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI--IGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFT 511 HSP 5 Score: 72.0182 bits (175), Expect = 2.478e-12 Identity = 49/194 (25.26%), Postives = 88/194 (45.36%), Query Frame = 3 Query: 12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 A+ LL I + G+ P +MYN + + K + L +MK G P FT N + A+ + +++ +P I L+ L +NG +A ++ +GF +V + I+ K + V+ LF + A G P+++ Y++L+ L ++ RT EA L+ ++ +GL P T Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVAT 651 HSP 6 Score: 71.2478 bits (173), Expect = 4.227e-12 Identity = 48/192 (25.00%), Postives = 85/192 (44.27%), Query Frame = 3 Query: 15 MDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSI 590 ++L I G P+ + Y+ + AL K + L+ +M G P V TYN +I + + G+++ + + PD+I+Y SLI+ L +G EA R+ EM+ K P+ +T+ LI+ K A F +M + P+ Y L+ S ++ ++ +G P S+ Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSV 790
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP233_ARATH (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17 Identity = 52/197 (26.40%), Postives = 107/197 (54.31%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQG--LTPDSIT 593 EA+ + ++ E GID + V ++ + L + K + L+ +++ D+ N+++ + G V+EA + ++++ S C+PD++SY ++IN L K G L +A ++ M + +PDV + +I+ ++ A +F ++ +G PN+VTYN LL L + RT + +L +++ +G +P+ +T Sbjct: 196 EAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC-DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT 391 HSP 2 Score: 79.7221 bits (195), Expect = 1.188e-14 Identity = 40/176 (22.73%), Postives = 91/176 (51.70%), Query Frame = 3 Query: 57 NTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 584 ++++YN + LGK+++ H ++ +M + + TY +L+ + A KV+EA+ VFE + D+++++ L+ L + +++ A F + + F D+ + ++ + V A R + ++A C P++V+Y +++ L + G+ +A++LY + PD Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPD 316
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP254_ARATH (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana GN=At3g25210 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.700e-17 Identity = 50/178 (28.09%), Postives = 98/178 (55.06%), Query Frame = 3 Query: 48 IDPNTVMYNTVFSALGKLK----QISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQ 569 ++ T++ +++ KL + + L ++MK +G PD F N++I ++ + +V+EAI+VF+E+ +P+ +Y+ L+ + + G + + +KEMQ KG P+ Y LI +++ A + MLA SP+++TYN +L L R GR +EA+++ + K++ Sbjct: 180 LETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357 HSP 2 Score: 72.4034 bits (176), Expect = 1.897e-12 Identity = 53/201 (26.37%), Postives = 96/201 (47.76%), Query Frame = 3 Query: 21 LLDKIHEKGIDPNTVMYNTVFS-ALGKLKQISHLHDLYQKM-KQDGPSPDVFTYNILIASF-GRAGKVN------EAIK-VFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 L++++ + + +YN + G+ + D+Y KM + D PD+ TY +L++S R K+N A++ + ++++++ PD N +I K +DEA FKEM G P+ TYS L++ + +V + +M +G PN Y +L+ L R EAV++ + L+PD +T Sbjct: 130 LIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLT 330
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP262_ARATH (Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana GN=EMB2076 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.444e-17 Identity = 47/173 (27.17%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 57 NTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGL 575 + V+YNT S G++ + +++ MK DG TY++L++ F R G+ A+ V++E+ N+ + ++I+ K D A F+ M +KG P++V +TLI GK KV + +++ + + G P+ T+N LL L ++ R + + L+ ++ + L Sbjct: 213 DVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENL 385 HSP 2 Score: 83.1889 bits (204), Expect = 1.075e-15 Identity = 55/227 (24.23%), Postives = 104/227 (45.81%), Query Frame = 3 Query: 12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSN-CKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLD--------------------------------CLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 A+ + + +KG+ PN V NT+ ++LGK ++ + +Y +K G PD +T+N L+ + +A + + +++F+ + + N C + YN+ + K G ++A EM+ G + +Y+ +I K+ K ++A +++ M C PN TY L+ CL R + A+ +LY K+++ GL PD T Sbjct: 303 ALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAK--ELYVKMREMGLEPDGKT 527 HSP 3 Score: 70.0922 bits (170), Expect = 9.417e-12 Identity = 48/195 (24.62%), Postives = 93/195 (47.69%), Query Frame = 3 Query: 12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGF-SPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 A+D+ D++ I + SA K ++ ++Q M + G P++ N LI S G+AGKV KV+ L++ KPD ++N+L+ L K ++ F ++ + + Y+T + K E A +L +M G + + +YN+++ E+S ++ A+ +Y + Q+ P++ T Sbjct: 268 ALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFT 462
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP230_ARATH (Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.444e-17 Identity = 47/194 (24.23%), Postives = 95/194 (48.97%), Query Frame = 3 Query: 12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 A+++L + + G P++ +N + + L K +H ++ + G D NILI +G + A+++ +E +P++++++ LI G +EA + M+++ PD +T++ LI K +VE L ++M +GC PN TY +L L R EA ++ +++ G+ P ++ Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344 HSP 2 Score: 78.5666 bits (192), Expect = 2.648e-14 Identity = 53/218 (24.31%), Postives = 96/218 (44.04%), Query Frame = 3 Query: 42 KGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPS--PDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLIN----------------------------CLG-------KNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 584 K P +Y + + G+ K + ++ + +K + + F YN++ AG++N AI++ + + C P S+N ++N CL ++GNL+ A E ++ P+V+T+S LI F K E A +L ++M E P+ +T+NIL+ L + GR E +DL ++K +G P+ Sbjct: 89 KDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPN 306
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP286_ARATH (Pentatricopeptide repeat-containing protein At3g58590 OS=Arabidopsis thaliana GN=At3g58590 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 9.722e-17 Identity = 57/187 (30.48%), Postives = 90/187 (48.13%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQI---SHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKL 560 E ++L + + I P+ + ++ S KL + S +H L K D D F N+LI +G+ G + +KVFEE N +I++ +LI+CLG +G EA +FKE GF PD V++ +++ V+ LF KM G P + Y +D L R+G EA L ++ Sbjct: 528 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKT--DFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKN----LITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREM 708
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.722e-17 Identity = 53/183 (28.96%), Postives = 99/183 (54.10%), Query Frame = 3 Query: 48 IDPNTVM-YNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 I+P+ ++ NT+++ G Q++ L+ KMK SP++ +N +I+ + + G EAI +F E+ N + +PD IS S I+ + G+L++A ++ + + DV S LI+ F K VE A +FD+ L ++V ++ ++ GR EA+ LY +++ G+ P+ +T Sbjct: 255 IEPDLLISLNTMYAKCG---QVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL----DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP117_ARATH (Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 9.722e-17 Identity = 44/168 (26.19%), Postives = 83/168 (49.40%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPS---PDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILL 503 +AM LL+++ E G P Y + + DL+ M G + P T+ ++I + + K E ++ + ++ C PD+ +Y +I + +DEA+ EM KG+ PD+VTY+ + + K + A +L+ +M+ C+P++ TYN+L+ Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453 HSP 2 Score: 86.2705 bits (212), Expect = 1.270e-16 Identity = 60/192 (31.25%), Postives = 89/192 (46.35%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGID---PNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGL 575 EA DL D + KG P + + AL K + +L +M G PDV TY +I A KV+EA K +E+ N PDI++YN + L +N DEA + M E +P V TY+ LI F + D + A + +M C ++ TY +++ L R EA L ++ +GL Sbjct: 321 EAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512 HSP 3 Score: 82.8037 bits (203), Expect = 1.404e-15 Identity = 53/181 (29.28%), Postives = 87/181 (48.07%), Query Frame = 3 Query: 48 IDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCK---PDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 581 + P+ +N +F +++ L ++M + G P+ FTY I +F +AG V+EA +F+ + P ++ +I L KN +E M G PDV TY +IE +KV+ A + D+M +G P+IVTYN L L + +T EA+ LY ++ + P Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAP 444 HSP 4 Score: 77.411 bits (189), Expect = 5.898e-14 Identity = 49/183 (26.78%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 54 PNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFS---PDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 P +N + AL K + L ++M+ PD T+N+L + R +A+K+ EE+ + KP+ +Y + I+ + G +DEA F M KG + P T++ +I K DK E L +M++ GC P++ TY +++ + + + EA ++ +G PD +T Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVT 413
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP379_ARATH (Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana GN=At5g13770 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.270e-16 Identity = 48/172 (27.91%), Postives = 86/172 (50.00%), Query Frame = 3 Query: 21 LLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAE 536 L D++ +KG D V Y+ + GK +++S L KMKQ G P+++ YN LI GRA + A K+++E++ + PD +SY S+I+ ++ L+ ++E + D ++ F KT +++ RL M EG + Y+ L+ L +G ++ Sbjct: 410 LFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQ 581 HSP 2 Score: 84.3445 bits (207), Expect = 4.825e-16 Identity = 56/230 (24.35%), Postives = 106/230 (46.09%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKM--KQDGPSPDVFTYNIL---------------------------------IASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 EA+++L+++ +KGI ++ +Y+ + A + +++ L+++ K+ P++ +L + F + EA+KV+E C+ ++Y IN + ++A M F EM +KGF VV YS +++ +GKT ++ A RL KM GC PNI YN L+D R+ A ++ ++K+ + PD ++ Sbjct: 266 EALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVS 495 HSP 3 Score: 75.8702 bits (185), Expect = 1.716e-13 Identity = 43/194 (22.16%), Postives = 98/194 (50.52%), Query Frame = 3 Query: 6 AEAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDS 587 AEA+ + + ++ + V Y +A +L++ + L+ +M + G V Y+ ++ +G+ ++++A+++ +++ CKP+I YNSLI+ G+ +L A +KEM+ PD V+Y+++I + ++ ++E L+ + + I++ ++ R E + L +K +G D+ Sbjct: 370 AEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDA 563 The following BLAST results are available for this feature:
BLAST of CX288860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 260
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288860 ID=CX288860; Name=CX288860; organism=Citrus clementina; type=EST; length=595bpback to top |