CX288860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP349_ARATH (Pentatricopeptide repeat-containing protein At4g34830, chloroplastic OS=Arabidopsis thaliana GN=At4g34830/At4g34820 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.166e-16 Identity = 49/195 (25.13%), Postives = 96/195 (49.23%), Query Frame = 3 Query: 12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEK--GFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSI 590 A +L + E G+ + +Y T+ S+ K ++ + +++ +M G ++ T+ LI RAG+V +A + L + N KPD + +N+LI+ G++G +D A EM+ + PD ++ L++ +VE A ++ + G Y I ++ +SG A +Y +K++ +TPD + Sbjct: 486 ARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEV 680 HSP 2 Score: 71.633 bits (174), Expect = 3.237e-12 Identity = 38/169 (22.49%), Postives = 80/169 (47.34%), Query Frame = 3 Query: 12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLER 518 A + + EK + P+ V ++ + G K + + Q K G +Y+ L+ + A +A++++E++++ +P I + N+LI L + L +A E++ G P+ +TYS L+ + D E++ +L + +G SPN++ + +R Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKR 831 HSP 3 Score: 71.2478 bits (173), Expect = 4.227e-12 Identity = 42/182 (23.08%), Postives = 88/182 (48.35%), Query Frame = 3 Query: 48 IDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 IDP+ + + A Q+ ++YQ + + G Y I + S ++G + A ++++++ + PD + +++LI+ G LDEA ++ + +G ++YS+L+ + A L++K+ + P I T N L+ L + +A++ ++K GL P++IT Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTIT 786 HSP 4 Score: 67.781 bits (164), Expect = 4.674e-11 Identity = 43/193 (22.28%), Postives = 90/193 (46.63%), Query Frame = 3 Query: 12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSI 590 A ++ IH+ GI +Y ++ K +Y+ MK+ +PD ++ LI G A ++EA + ++ ++ + ISY+SL+ + +A +++++ P + T + LI + +++ A D++ G PN +TY++L+ ER + L ++ K G++P+ I Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PPR34_ARATH (Pentatricopeptide repeat-containing protein At1g11710, mitochondrial OS=Arabidopsis thaliana GN=At1g11710 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.829e-16 Identity = 56/197 (28.43%), Postives = 104/197 (52.79%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEG--CSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 EA++ +I EK + + V +NT+ + K+++ + M G S D ++ LI + + GK+ A+++++ + N +++ YNS++N L K G A M+ K D+VTY+TL+ KT VE A + KM + S ++VT+NI+++ L + G +A ++ + ++G+ PDSIT Sbjct: 414 EAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSIT 606 HSP 2 Score: 80.8777 bits (198), Expect = 5.335e-15 Identity = 51/196 (26.02%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHM---RFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSI 590 A +++++ +G + N L + +I +Y++M G +V T+N++I SF + K+ EA+ VF + P+++S+N +I+ K G++ A + M SP+ VTY+++I F K ++++A R+ M+ G N TY L+D R+G + EA+ L ++ +GL +++ Sbjct: 167 AYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTV 362 HSP 3 Score: 79.7221 bits (195), Expect = 1.188e-14 Identity = 52/180 (28.89%), Postives = 90/180 (50.00%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGR--TAEAV 542 EA+ L D++ KG+ NTV+YN++ L I + + M D FT I++ R G V EA++ ++ DI+ +N+L++ ++ L A M +G S D +++ TLI+ + K K+E A ++D M+ + N+V YN +++ L + G AEAV Sbjct: 344 EALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAV 523 HSP 4 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 47/172 (27.33%), Postives = 85/172 (49.42%), Query Frame = 3 Query: 12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDI--ISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTY-NILLDCLER 518 A+++ D + + N V+YN++ + L K + M+ D+ TYN L+ + G V EA + +++ + + + +++N +IN L K G+ ++A K M E+G PD +TY TLI F K E L D ++ +G +P+ Y +I+ L+R Sbjct: 485 ALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDR 652 HSP 5 Score: 69.707 bits (169), Expect = 1.230e-11 Identity = 47/203 (23.15%), Postives = 91/203 (44.83%), Query Frame = 3 Query: 48 IDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEA-----HMRFKEMQ------------------------------EKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLY 551 + PN V YN+V + K ++ + M + G + TY L+ ++GRAG +EA+++ +E+ + + + YNS++ L G+++ A M K MQ EK D+V ++TL+ F + K+ A ++ ML +G S + +++ L+D + G+ A+++Y Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIY 489 HSP 6 Score: 67.3958 bits (163), Expect = 6.104e-11 Identity = 48/184 (26.09%), Postives = 89/184 (48.37%), Query Frame = 3 Query: 51 DPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQG---LTPDSIT 593 D ++M N + KL + L L + + G SPDVF + L+ + + G A +V E+ + + N+ + CL +D +KEM G+ +V T++ +I F K K+ A +F +ML G PN+V++N+++D ++G A+ L K+ ++P+++T Sbjct: 112 DALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVF--DSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVT 293
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP422_ARATH (Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana GN=At5g47360 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.829e-16 Identity = 55/193 (28.50%), Postives = 102/193 (52.85%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKG----FSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVD-LYAKLKQQG 572 EA+ +L K E + +TV YN V ++ L ++M G PDV TY +I + AGK+++A ++ +E+ +C + ++Y+ ++ + K+G+++ A EM+++ SP+ VTY+ +I+ F + +VE A + D+M GC PN VT +L+ + + +A+ L KL + G Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340 HSP 2 Score: 75.8702 bits (185), Expect = 1.716e-13 Identity = 44/148 (29.73%), Postives = 81/148 (54.73%), Query Frame = 3 Query: 162 DVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQG----LTPDSIT 593 +V T I++ +A +EA+ V + N D ++YN +I G+L+ A M KEM G PDV+TY+++I + K++ A RL +M C N VTY+ +L+ + +SG A++L A+++++ ++P+++T Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVT 276 HSP 3 Score: 72.7886 bits (177), Expect = 1.453e-12 Identity = 45/148 (30.41%), Postives = 74/148 (50.00%), Query Frame = 3 Query: 162 DVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEG----CSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 D YN++I F G +N A + +E++ PD+I+Y S+IN G +D+A KEM + + VTYS ++E K+ +E A L +M E SPN VTY +++ R EA+ + ++ +G P+ +T Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVT 311
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PPR31_ARATH (Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana GN=At1g10910 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.075e-15 Identity = 44/164 (26.83%), Postives = 82/164 (50.00%), Query Frame = 3 Query: 102 KQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLI-NCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSI 590 K +S ++YQ + + +V+ N +++ + GK++ IK+F++++ KPD+++YN+L+ C+ +A E+ G D V Y T++ + E A +M EG SPNI Y+ LL+ G +A +L ++K GL P+ + Sbjct: 145 KNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKV 308 HSP 2 Score: 82.4185 bits (202), Expect = 1.834e-15 Identity = 46/180 (25.56%), Postives = 92/180 (51.11%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDL 548 +A++L+ ++ GI ++VMY TV + + + Q+MK +G SP+++ Y+ L+ S+ G +A ++ E+++ P+ + +L+ K G D + E++ G++ + + Y L++ K K+E A +FD M +G + +I++ L RS R EA +L Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399 HSP 3 Score: 81.6481 bits (200), Expect = 3.128e-15 Identity = 50/190 (26.32%), Postives = 96/190 (50.53%), Query Frame = 3 Query: 6 AEAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRA-GKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQG 572 ++A+++ I ++ N + N++ S L K ++ L+ +MK+DG PDV TYN L+A + +AI++ EL ++ + D + Y +++ NG +EA ++M+ +G SP++ YS+L+ + + A L +M + G PN V LL + G + +L ++L+ G Sbjct: 148 SKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAG 337 HSP 4 Score: 77.7962 bits (190), Expect = 4.516e-14 Identity = 50/172 (29.07%), Postives = 88/172 (51.16%), Query Frame = 3 Query: 72 NTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIE-CFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 584 N + G + L L++ M+Q G V TY+ I G A V++A+++++ + + + K ++ NS+++CL KNG LD F +M+ G PDVVTY+TL+ C + A L ++ G + V Y +L +GR+ EA + ++K +G +P+ Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQHGKI-SVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPN 271 HSP 5 Score: 76.6406 bits (187), Expect = 1.006e-13 Identity = 47/189 (24.87%), Postives = 93/189 (49.21%), Query Frame = 3 Query: 21 LLDKIHEKGIDPNTVMYNTVFSALGKLKQ-ISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 584 L D++ G+ P+ V YNT+ + K+K +L ++ +G D Y ++A G+ EA ++++ P+I Y+SL+N G+ +A EM+ G P+ V +TL++ + K + + L ++ + G + N + Y +L+D L ++G+ EA ++ +K +G+ D Sbjct: 188 LFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376 HSP 6 Score: 70.4774 bits (171), Expect = 7.210e-12 Identity = 40/174 (22.99%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 72 NTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILL-DCLERSGRTAEAVDLYAKLKQQGLTPDSI 590 N+ + + ++ D +++ V N+++ FG +G+ + I++FE ++ K + +Y+S I +G N+ +A ++ + ++ +V ++++ C K K++ +LFD+M +G P++VTYN LL C++ +A++L +L G+ DS+ Sbjct: 67 NSYLARKSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVGAK-NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSV 238
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.404e-15 Identity = 46/191 (24.08%), Postives = 89/191 (46.60%), Query Frame = 3 Query: 12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQD-GPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 581 A + D++ E+ + +N + +A K+ + +++++ PDV +YN LI G EA+ + +E+EN KPD I++N L++ G +E + M EK D+ +Y+ + +K E LFDK+ P++ T+ ++ G+ EA+ Y ++++ G P Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRP 315 HSP 2 Score: 75.0998 bits (183), Expect = 2.927e-13 Identity = 49/198 (24.75%), Postives = 91/198 (45.96%), Query Frame = 3 Query: 6 AEAMDLLDKIHEK-----GIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 584 ++ DL++ I ++ I+P+ YNT+ L + L +++ G PD T+NIL+ GK E +++ + N K DI SYN+ + L +E F +++ PDV T++ +I+ F K++ A + ++ GC P +N LL + ++G A +L ++ + L D Sbjct: 154 SKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVD 351 HSP 3 Score: 75.0998 bits (183), Expect = 2.927e-13 Identity = 40/180 (22.22%), Postives = 86/180 (47.78%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDL 548 EA+ L+D+I KG+ P+ + +N + + ++ +M + D+ +YN + K E + +F++L+ + KPD+ ++ ++I G LDEA +KE+++ G P +++L+ K +E A L ++ A+ + ++D L + + EA ++ Sbjct: 195 EAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374 HSP 4 Score: 69.3218 bits (168), Expect = 1.606e-11 Identity = 44/173 (25.43%), Postives = 83/173 (47.98%), Query Frame = 3 Query: 78 VFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENS-NCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 + + G++ + ++ +M + ++N L+ + + K + +F+EL + +PD+ SYN+LI L G+ EA E++ KG PD +T++ L+ K E +++ +M+ + +I +YN L L ++ E V L+ KLK L PD T Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFT 284
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP222_ARATH (Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidopsis thaliana GN=HCF152 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.404e-15 Identity = 48/199 (24.12%), Postives = 107/199 (53.77%), Query Frame = 3 Query: 3 TAEAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEEL-ENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAE-GCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 TA ++ + + ++ P+ V Y TV SA + + +M + G + TYN+L+ + + +++ A + E+ E++ +PD++SYN +I+ + A F EM+ +G +P ++Y+TL++ F + + ++A R+FD+M+ + +++ +N+L++ R G +A + +++K+ G P+ T Sbjct: 433 TARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVAT 631 HSP 2 Score: 68.1662 bits (165), Expect = 3.578e-11 Identity = 53/213 (24.88%), Postives = 99/213 (46.48%), Query Frame = 3 Query: 12 AMDLLDKIHEK-GIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENS-NCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCS--------------------PNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 584 A DLL ++ E GI+P+ V YN + + + + +M+ G +P +Y L+ +F +G+ A +VF+E+ N K D+I++N L+ + G +++A M+E GF P+V TY +L + K A L+ K + E C+ P+ + L D R+ +A+++ A +++ G+ P+ Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLW-KEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPN 717
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP209_ARATH (Pentatricopeptide repeat-containing protein At3g02650, mitochondrial OS=Arabidopsis thaliana GN=At3g02650 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.395e-15 Identity = 54/194 (27.84%), Postives = 101/194 (52.06%), Query Frame = 3 Query: 18 DLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLD--CLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 DL + +GI P ++ V +L +++ + L M GP+P +N+++ + + G ++EA +V + +E+ KPD+ +Y +I+ K G +DEA E ++K VTY LI + K ++ + A +L ++M G PN YN L+ CL ++ +A L+ ++KQ+GL ++I+ Sbjct: 362 DLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL-KALDWEKAEVLFEEMKQKGLHLNAIS 550 HSP 2 Score: 74.3294 bits (181), Expect = 4.993e-13 Identity = 51/185 (27.57%), Postives = 89/185 (48.11%), Query Frame = 3 Query: 21 LLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFG-KTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQG 572 LLD I KG P ++N V A K + ++ + M+ G PDV+TY ++I+ + + G ++EA ++ E + + K ++Y++LI K DEA EM G P+ Y+ LI+ F K E A LF++M +G N ++ ++ R + ++ AK+ + G Sbjct: 395 LLDMI-SKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLI--------RAVKEMESEAKVTEDG 570
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP173_ARATH (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana GN=At2g27800 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.085e-15 Identity = 51/183 (27.87%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 54 PNTVMYNTVFSAL---GKLKQISHLH-----DLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENS-NCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGL 575 P Y+ +F AL G I+H++ L+++M G PDVF N L+ + + VN+A+++F ++ +C+P+ +Y+ LI+ L G A EM+ KGF P+ +Y++L+ F + +++ A + +M+ G + ++Y L+D R G+ EA L L+++ L Sbjct: 243 PTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425 HSP 2 Score: 78.1814 bits (191), Expect = 3.458e-14 Identity = 51/184 (27.72%), Postives = 89/184 (48.37%), Query Frame = 3 Query: 69 YNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEEL---ENSNCKPDIISYNSLINCL---GKNGNLDEAHMR-----FKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKM-LAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 584 Y+ LG K + D+ ++ + YN +I F +AGK+ A+ +F + +N C+P I +Y+ L L G N ++ +M F++M + G PDV + L++ + + V A R+F +M + C PN TY+ L+ L GRT A +L +++K +G P+ Sbjct: 175 YHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPN 358
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP451_ARATH (Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana GN=DG1 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.968e-15 Identity = 50/192 (26.04%), Postives = 89/192 (46.35%), Query Frame = 3 Query: 30 KIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQE-KGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKL---KQQGLTPDSIT 593 ++ + G+ PN Y + + + +HD ++KMK G +P TY +L+ + R GK+ EA++ ++E Y L CL NG +A + M+ + P +T++ LI V+ +F M + C PNI T N++L R+ +EA +L+ ++ K+ L P+ T Sbjct: 366 ELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYM-KDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYT 556 HSP 2 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 46/186 (24.73%), Postives = 85/186 (45.70%), Query Frame = 3 Query: 66 MYNTVFSALGKLKQISHLHDLYQKMKQDGPS-PDVFTYNILIASFGRAGKVNEAIKVFEELENSNCK---------------PDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGL 575 +Y + S LG ++ ++ +M D PD+ Y+ + + G+AG + E +KV E + K PD++ YN+++N F E+++ G P+ TY +E ++ K + F KM + G +P +TY +L+ L R G+ EAV+ ++Q+G+ Sbjct: 257 VYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGV 442
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP229_ARATH (Pentatricopeptide repeat-containing protein At3g14330 OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.968e-15 Identity = 51/179 (28.49%), Postives = 90/179 (50.28%), Query Frame = 3 Query: 9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAE-GCSPNIVTYNILLDCLERSGRTAEAV 542 E +L K+ E+ I + T+ A ++ + +++ ++ + PDV N L+ +G+ G+V + +VF+ + D+ S+N ++NC NGN++E F+ M E G +PD +T+ L+ T E LF++M E SP + Y L+D L R+G+ EAV Sbjct: 320 EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK----DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAV 494 HSP 2 Score: 76.6406 bits (187), Expect = 1.006e-13 Identity = 54/217 (24.88%), Postives = 101/217 (46.54%), Query Frame = 3 Query: 48 IDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEK--GFS---------------------------------PDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593 I+P + A LK + ++ ++ + D YN+L+ + +G ++A KVF+ + N ++++NSLI+ L K + E F++MQE+ GFS PDV ++L++ +GK +VE + R+FD ML + ++ ++NI+L+C +G E ++L+ + + G+ PD IT Sbjct: 232 IEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERN----VVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK----DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGIT 440 HSP 3 Score: 70.0922 bits (170), Expect = 9.417e-12 Identity = 40/180 (22.22%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 30 KIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQ 569 K+ + + N V +N++ S L K ++ + +L++KM+++ T ++ + R + ++ ++ S KPD+ NSL++ GK G ++ + F M K D+ +++ ++ C+ +E LF+ M+ G +P+ +T+ LL +G T + L+ ++K + Sbjct: 292 KVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK----DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTE 467 The following BLAST results are available for this feature:
BLAST of CX288860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 260
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288860 ID=CX288860; Name=CX288860; organism=Citrus clementina; type=EST; length=595bpback to top |