CX288860

Overview
NameCX288860
Unique NameCX288860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length595
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP391_ARATH (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 9.100e-15
Identity = 53/192 (27.60%), Postives = 90/192 (46.88%), Query Frame = 3
Query:    9 EAMDLLDKIHEK-GIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 581
            +A++L + + +  G      +YN++  AL  +K     + L ++M + G  PD  TY IL+  +  AGK+ EA +  +E+      P     + LI  L   G L+ A     +M + GF PD+ T++ LIE   K+ +VE    ++      G   +I TY  L+  + + G+  EA  L     + G  P
Sbjct:  164 QAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKP 355          

HSP 2 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 42/172 (24.42%), Postives = 79/172 (45.93%), Query Frame = 3
Query:   12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGR 527
            A +++ K+ + G  P+   +N +  A+ K  ++    ++Y    + G   D+ TY  LI +  + GK++EA ++         KP    Y  +I  + +NG  D+A   F +M+ K   P+   Y+ LI   G+  K   A     +M   G  P    ++++ D L+  G+
Sbjct:  271 AKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGK 442          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP134_ARATH (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 9.100e-15
Identity = 56/217 (25.81%), Postives = 94/217 (43.32%), Query Frame = 3
Query:   57 NTVMYNTVFSALGKLKQISHLHDL--YQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKN------------------------------------GNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            N   +    S L    ++  + DL  +QK    G         I++  +G+AG   +A+  F  ++   CK  + S+N+ +  L  N                                    G LD A+M  +EM++ G +PDVVTY+TLI    K ++  +   L++ M+ +GC PN+ T+N+ +  L    R  +A DL   + +  + PDSIT
Sbjct:   70 NRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIML--YGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSIT 284          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP291_ARATH (Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 48/175 (27.43%), Postives = 85/175 (48.57%), Query Frame = 3
Query:   69 YNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            +N +  A    +++     +++K+     +PDV T NIL+  F  AG V      + E+     KP+ ++Y   I+   K  N  EA   F++M    F   V   +TLI   G       A +LFD++   G +P+   YN L+  L + G  + A+ +  +++++G+ PDS+T
Sbjct:  179 FNILLRAFCTEREMKEARSIFEKLHSRF-NPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVT 352          

HSP 2 Score: 70.4774 bits (171), Expect = 7.210e-12
Identity = 46/197 (23.35%), Postives = 92/197 (46.70%), Query Frame = 3
Query:    9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTA--EAVDLYAKLKQQGLTPDSIT 593
            EA  + +K+H +  +P+    N +     +   ++     Y +M + G  P+  TY I I  F +     EA+++FE+++  +    +    +LI+  G   N  +A   F E+ ++G +PD   Y+ L+    K   V  A ++  +M  +G  P+ VT++ +   + +S         + Y K+K++ L P + T
Sbjct:  194 EARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPT 389          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14
Identity = 52/196 (26.53%), Postives = 102/196 (52.04%), Query Frame = 3
Query:    6 AEAMDLLDKIHEKG-IDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAE-GCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDS 587
            +EA+++ + + E+G I  N   + +V  A  +   +     L+ ++ ++G   DVF    L   +G+ G++ +A+ +F ++   N  P    +N+LI C G +G+ ++A M FKEM ++G  PD +T+ TL+     +  V+     F+ M  + G +P++  Y  ++D   R+G+   A+     +K   L PD+
Sbjct:  432 SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP----WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF---IKSMSLQPDA 620          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP111_ARATH (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14
Identity = 53/195 (27.18%), Postives = 91/195 (46.67%), Query Frame = 3
Query:    3 TAEAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDS 587
            + EA+ L D ++   ++ N V +  V  A   +  +     ++ K+   G   D+FT   LI  + + G +N A  VF  + + +    I+S++S+IN  G +G +  A   F +M E G  P+ V +  ++   G +  VE     F+ M + G SPN   +   +D L RSG   EA   Y  +K+     D+
Sbjct:  486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRS----IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEA---YRTIKEMPFLADA 672          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP364_ARATH (Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.516e-14
Identity = 48/181 (26.52%), Postives = 90/181 (49.72%), Query Frame = 3
Query:    9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAE-GCSPNIVTYNILLDCLERSGRTAEAVDL 548
            EA+ L  +     ++ N    ++V  A   L  +     ++  + + G   +VF  +  +  + + G + E+  +F E++  N +     +N++I+   K+    E  + F++MQ+ G  P+ VT+S+L+   G T  VE   R F  M    G SPN+V Y+ ++D L R+G  +EA +L
Sbjct:  246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE----LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 422          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP193_ARATH (Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidopsis thaliana GN=At2g38420 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.516e-14
Identity = 49/188 (26.06%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   48 IDPNTVMYNTVFSALGKLKQ------ISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            +DP   +Y+ + S++ K K       I +L DL    ++   SP +  Y +++      G+  E + V  +++    +PD++ Y  ++  +  + +  +A   F E+   G +PDV TY+  I    K + +E A ++   M   G  PN+VTYNIL+  L ++G  + A  L+ +++  G+  +S T
Sbjct:  212 VDPR--LYSRLLSSVCKHKDSSCFDVIGYLEDL----RKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHT 393          

HSP 2 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 44/184 (23.91%), Postives = 86/184 (46.74%), Query Frame = 3
Query:    9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKL 560
            E + +L+++    ++P+ V Y  V   +   +       L+ ++   G +PDV+TYN+ I    +   +  A+K+   +     +P++++YN LI  L K G+L  A   +KEM+  G + +  T+  +I  + + D+V  A  L ++               ++  L   G   +AV+L A L
Sbjct:  269 EVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP431_ARATH (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.898e-14
Identity = 52/224 (23.21%), Postives = 104/224 (46.43%), Query Frame = 3
Query:   30 KIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPD------------------------------------VVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            K+ +  ++ + +++NT+ +A  +         L+  M+ +G  P+V T+N++I S  R G+V+EA  +F ++++S   P++IS+ +++N + +NG  +EA +  ++MQE G  P+                                    V   ++L++ + K   +  A ++F   L       +   N ++      G   EA+ LY  L+  GL PD+IT
Sbjct:  431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS----ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNIT 650          

HSP 2 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 36/144 (25.00%), Postives = 82/144 (56.94%), Query Frame = 3
Query:  162 DVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            D+   + ++  + + G + +A KVF+    S  + D+I +N+L+    ++G   EA   F  MQ +G  P+V+T++ +I    +  +V+ A  +F +M + G  PN++++  +++ + ++G + EA+    K+++ GL P++ +
Sbjct:  409 DIVLASTVMDMYAKCGSIVDAKKVFD----STVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP297_ARATH (Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 5.898e-14
Identity = 43/173 (24.86%), Postives = 83/173 (47.98%), Query Frame = 3
Query:   57 NTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGL 575
            N V +N++ S L     +     L  +M+++G  PD  T+N L + +   GK  +A+ V  +++     P+++S+ ++ +   KNGN   A   F +MQE+G  P+  T STL++  G    +     +    L +    +      L+D   +SG    A++++  +K + L
Sbjct:  290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL 462          

HSP 2 Score: 72.7886 bits (177), Expect = 1.453e-12
Identity = 43/195 (22.05%), Postives = 101/195 (51.79%), Query Frame = 3
Query:    9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            +A+ +L ++   G+ P+T   +++  A+ +   +     ++  + ++    DV+    LI  + + G +  A  VF+ ++  N    I+++NSL++ L     L +A      M+++G  PD +T+++L   +    K E A  +  KM  +G +PN+V++  +     ++G    A+ ++ K++++G+ P++ T
Sbjct:  208 DAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN----IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398          

HSP 3 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 42/195 (21.54%), Postives = 94/195 (48.21%), Query Frame = 3
Query:    9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            +A  L+ ++ ++GI P+ + +N++ S    L +     D+  KMK+ G +P+V ++  + +   + G    A+KVF +++     P+  + ++L+  LG    L            K    D    + L++ +GK+  ++ A  +F  +     + ++ ++N +L      GR  E +  ++ + + G+ PD+IT
Sbjct:  309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK----NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT 499          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP269_ARATH (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana GN=At3g48250 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.898e-14
Identity = 55/190 (28.95%), Postives = 93/190 (48.95%), Query Frame = 3
Query:   15 MDLLDKIHEK----GIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAE-GCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQ 569
            +DL+ ++  K    G   +  +Y+ +  +L  + +     ++ + M+  G  PD  TY+ L+    +A ++ EA  V +++E   C PDI ++  LI    KN  LD+A   F  M EKGF  D      LI+ F   +K E A     +M+      P   TY +L+D L +  ++ EA+DL   +K+Q
Sbjct:  351 LDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ 540          

HSP 2 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 54/218 (24.77%), Postives = 93/218 (42.66%), Query Frame = 3
Query:   45 GIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCL---------------------GKN----------------GNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDS 587
            G   +TV YN     L +   ++    +  +MK  G   D+ TY  +   F ++  + E +K++E + +   KP I   + L+  L                     GK+                G  DEA    K M+  G+ PD +TYS L+    K  ++E A  + D+M A+GC P+I T+ IL+    ++    +A+  +A + ++G   DS
Sbjct:  258 GYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDS 475          
The following BLAST results are available for this feature:
BLAST of CX288860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 260
Match NameE-valueIdentityDescription
PP391_ARATH9.100e-1527.60Pentatricopeptide repeat-containing protein At5g18... [more]
PP134_ARATH9.100e-1525.81Pentatricopeptide repeat-containing protein At1g80... [more]
PP291_ARATH1.552e-1427.43Pentatricopeptide repeat-containing protein At3g61... [more]
PP348_ARATH3.458e-1426.53Pentatricopeptide repeat-containing protein At4g33... [more]
PP111_ARATH3.458e-1427.18Putative pentatricopeptide repeat-containing prote... [more]
PP364_ARATH4.516e-1426.52Pentatricopeptide repeat-containing protein At5g04... [more]
PP193_ARATH4.516e-1426.06Pentatricopeptide repeat-containing protein At2g38... [more]
PP431_ARATH5.898e-1423.21Pentatricopeptide repeat-containing protein At5g55... [more]
PP297_ARATH5.898e-1424.86Pentatricopeptide repeat-containing protein At4g01... [more]
PP269_ARATH5.898e-1428.95Pentatricopeptide repeat-containing protein At3g48... [more]

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Properties
Property NameValue
Genbank descriptionC02006C04SK IF1 Citrus clementina cDNA clone C02006C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288860 ID=CX288860; Name=CX288860; organism=Citrus clementina; type=EST; length=595bp
AGACAGCAGAGGCTATGGACCTGCTTGATAAGATTCATGAAAAAGGAATA
GACCCCAATACAGTCATGTATAACACAGTATTTTCAGCTCTTGGCAAGTT
GAAGCAAATATCACATCTGCATGATCTTTACCAAAAAATGAAGCAAGATG
GCCCTTCTCCAGATGTATTTACCTACAATATCCTGATTGCAAGCTTTGGT
AGGGCAGGAAAGGTTAATGAGGCCATTAAAGTTTTTGAAGAACTAGAGAA
TAGCAATTGTAAACCTGATATTATCTCATATAATTCATTGATCAATTGTC
TTGGGAAGAATGGTAATCTTGATGAAGCTCACATGAGGTTTAAAGAGATG
CAGGAGAAAGGGTTCAGTCCTGATGTTGTTACATATAGTACGCTAATTGA
ATGCTTTGGCAAGACGGACAAAGTTGAGATGGCATGTAGATTGTTTGACA
AGATGCTTGCTGAAGGATGCTCCCCCAACATTGTGACATACAATATCTTA
CTTGACTGTCTTGAAAGAAGTGGGAGAACTGCTGAAGCAGTGGATCTTTA
TGCAAAACTTAAGCAACAGGGGTTAACACCTGATTCAATCACATA
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