CX288860

Overview
NameCX288860
Unique NameCX288860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length595
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP137_ARATH (Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidopsis thaliana GN=At1g80880 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.453e-12
Identity = 33/119 (27.73%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  156 SPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCL 512
            +P+  +Y+ +I+ F + G + +++++++E++     P I  YNSL+  L +    DEA    K++ E+G  PD VTY+++I    +  K+++A  +   M++E  SP + T++  L+ +
Sbjct:  291 TPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV 409          

HSP 2 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 40/141 (28.37%), Postives = 78/141 (55.32%), Query Frame = 3
Query:  162 DVFTYNILIASFGRAGK-VNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 581
            DV  +N+++  +      V EA +++ E+ N    P+  SY+ +I+C  K GNL ++   + EM+++G +P +  Y++L+    + D  + A +L  K+  EG  P+ VTYN ++  L  +G+   A ++ A +  + L+P
Sbjct:  257 DVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSP 397          

HSP 3 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 46/171 (26.90%), Postives = 79/171 (46.20%), Query Frame = 3
Query:   48 IDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKL 560
            I PN   Y+ + S   K+  +     LY +MK+ G +P +  YN L+    R    +EA+K+ ++L     KPD ++YNS+I  L + G LD A      M  +  SP V T+   +E        E    +  +M      P   T+ ++L  L +  +   A+ ++A++
Sbjct:  290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEM 456          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 38/188 (20.21%), Postives = 95/188 (50.53%), Query Frame = 3
Query:   30 KIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            K+ +K    + V Y  +         I +   L+ ++    P  DV ++N +I+ +   G   EA+++F+++  +N +PD  +  ++++   ++G+++        + + GF  ++   + LI+ + K  ++E AC LF+++  +    +++++N L+          EA+ L+ ++ + G TP+ +T
Sbjct:  190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI----PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369          

HSP 2 Score: 70.0922 bits (170), Expect = 9.417e-12
Identity = 45/181 (24.86%), Postives = 89/181 (49.17%), Query Frame = 3
Query:   51 DPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            +PN +++NT+F              LY  M   G  P+ +T+  ++ S  ++    E  ++   +    C  D+  + SLI+   +NG L++AH  F    +K    DVV+Y+ LI+ +     +E A +LFD++  +    ++V++N ++     +G   EA++L+  + +  + PD  T
Sbjct:   96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF----DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP240_ARATH (Pentatricopeptide repeat-containing protein At3g18020 OS=Arabidopsis thaliana GN=At3g18020 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 55/232 (23.71%), Postives = 101/232 (43.53%), Query Frame = 3
Query:    9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISH-LHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSN-CKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKML-----------------------------------AEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            E +++L  + +    P+    NTV + L K+ ++   +  L   M     +PD  T N ++      G+  EA+ V   +   N  KP +++YN++I  L K    DEA   F ++++   + D  TY+ +I+    T+KV+MA + +D ++                                     G  PN+V YN ++    RSG   EA  +  ++++ G  PD++T
Sbjct:  430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVT 661          

HSP 2 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 46/167 (27.54%), Postives = 85/167 (50.90%), Query Frame = 3
Query:    9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCK--PDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILL 503
            EA+ +LD +  +G  P+++  ++V  +L    +    H  +      G  PD  T N++IA    +      + V   L     +  P + +YN L+N L     + +AH    +M+ +G  PDVVT++TLI  + +  ++E+A ++FD+M   G  PN +T ++L+
Sbjct:   73 EALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 47/183 (25.68%), Postives = 90/183 (49.18%), Query Frame = 3
Query:   21 LLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQ 569
            L D++  KG+    + +N V S   +      + +LY++MK  G  PD FT   +++S    G      +V + +E++   P++   N+ I+   + GNL +A   F  M  K     +V+++ +I C+G     E+   LFD M+  G  P+   + ++L     SG T + ++L+  +K++
Sbjct:  213 LFDEMPVKGL----ITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKS----LVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 387          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 39/166 (23.49%), Postives = 81/166 (48.80%), Query Frame = 3
Query:   96 KLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            K K + +   ++ +MKQ     +V ++  ++  +G+ G+  EA+K+F +++ S   PD  +    I+      +L+E      +    G    V   ++L+  +GK   ++ + RLF++M       + V++  ++    + GR  E + L+ K+ Q GL PD +T
Sbjct:  317 KCKCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVT 474          

HSP 2 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 46/179 (25.70%), Postives = 81/179 (45.25%), Query Frame = 3
Query:    9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAE-GCSPNIVTYNILLDCLERSGRTAEAV 542
            EA+ +   +   GIDP+        SA   +  +      + K    G    V   N L+  +G+ G ++++ ++F E+       D +S+ ++++   + G   E    F +M + G  PD VT + +I    +   VE   R F  M +E G  P+I  Y+ ++D   RSGR  EA+
Sbjct:  354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PPR87_ARATH (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 48/179 (26.82%), Postives = 79/179 (44.13%), Query Frame = 3
Query:   45 GIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 581
            GI+P+   YN +     +    S  + +  +M++ G  P+  ++ ++I+ F    K +E  KV   +++      + +YN  I  L K     EA      M   G  P+ VTYS LI  F   D  E A +LF  M+  GC P+   Y  L+  L + G    A+ L  +  ++   P
Sbjct:  182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360          

HSP 2 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 47/188 (25.00%), Postives = 87/188 (46.28%), Query Frame = 3
Query:    6 AEAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQ 569
            + +  ++ ++  KGI PN+  +  + S      +   +  +   MK  G +  V TYNI I S  +  K  EA  + + + ++  KP+ ++Y+ LI+      + +EA   FK M  +G  PD   Y TLI    K    E A  L  + + +   P+      L++ L +  +  EA +L  ++K++
Sbjct:  204 SSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391          

HSP 3 Score: 70.8626 bits (172), Expect = 5.521e-12
Identity = 45/149 (30.20%), Postives = 69/149 (46.31%), Query Frame = 3
Query:  141 KQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDS 587
            K  G  PD+ TYN +I  F  +G  + +  +  E+E    KP+  S+  +I+        DE       M+++G +  V TY+  I+   K  K + A  L D ML+ G  PN VTY+ L+          EA  L+  +  +G  PDS
Sbjct:  179 KMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDS 327          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 46/194 (23.71%), Postives = 98/194 (50.52%), Query Frame = 3
Query:    9 EAMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGC-SPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDS 587
            EA+DL  ++ ++G+ P+     ++ S    L  + +   ++  + +     DV+  ++L+  + + G++ +A  VF+   +     DII +NS+I+    +G  +EA   F EM   G  P+ VT   ++       K+E    +F+ M ++ C +P +  Y+  +D L R+G+  +A++L   ++   + PD+
Sbjct:  314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL---IESMTIKPDA 500          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP402_ARATH (Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis thaliana GN=At5g36300 PE=3 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 43/169 (25.44%), Postives = 91/169 (53.85%), Query Frame = 3
Query:  126 LYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELE-NSNCKPDIISYNSLINCLGKNGNLDEAHMRFK-----------EMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQ-GLTPDSIT 593
            + +++++ G   DV  YN +I +FG+ G+++E ++V E+L+ +S+ +P+I ++NSLI     +G +D A   F            +++ +G +P    + TL   + +    +   ++   M  EG  PN++  N+L++    +G+  EA+ +Y  +K+   + PD +T
Sbjct:  137 IVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQVLEKLQRSSDSRPNIRTWNSLIRWHCHHGAVDMALELFTMIFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWIHPDVVT 305          

HSP 2 Score: 69.707 bits (169), Expect = 1.230e-11
Identity = 40/138 (28.99%), Postives = 66/138 (47.83%), Query Frame = 3
Query:   36 HEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEK-GFSPDVVTYSTLIECFGKTDKVEMACRLF 446
            H   +D    ++  +F  +G         +L  K+K  G +P    +  L  ++ + G   + +KV + +EN   +P++I  N LIN  G  G   EA   +  ++E     PDVVTYSTL++ F +  K EM C  +
Sbjct:  198 HHGAVDMALELFTMIFEDIG---------ELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYEMVCSFY 326          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 46/194 (23.71%), Postives = 97/194 (50.00%), Query Frame = 3
Query:   12 AMDLLDKIHEKGIDPNTVMYNTVFSALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 593
            A +   K+  + +  +T M +  +S  G+L     + D  +K        D+  +  +I+++  +    EA++VFEE+  S  KPD++S  S+I+     G LD+A      +   G   ++   + LI  + K   ++    +F+KM       N+V+++ +++ L   G  ++A+ L+A++KQ+ + P+ +T
Sbjct:  266 AREFFRKMSVRNLFVSTAMVSG-YSKCGRLDDAQVIFDQTEKK-------DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR----NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447          
BLAST of CX288860 vs. ExPASy Swiss-Prot
Match: PP220_ARATH (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 52/197 (26.40%), Postives = 93/197 (47.21%), Query Frame = 3
Query:    9 EAMDLLDKIHEKGIDPNTVMYNTVF---SALGKLKQISHLHDLYQKMKQDGPSPDVFTYNILIASFGRAGKVNEAIKVFEELENSNCKPDIISYNSLINCLGKNGNLDEAHMRFKEMQEKGFSPDVVTYSTLIECFGKTDKVEMACRLFDKMLAE-GCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDS 587
            EA+    ++   G+ P+   + TV    S L  L++   +H L   +  D    D  T N LI  + + G +  + +VF+E+     + +++S+NSLIN   KNG  ++A   F  M++    PD +T+  ++       KV    ++F+ M+ + G    +     ++D L R G   EA D    ++ Q L PD+
Sbjct:  715 EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD---LDELTSNTLIDMYAKCGDMKGSSQVFDEMRR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF---IEAQNLKPDA 902          
The following BLAST results are available for this feature:
BLAST of CX288860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 260
Match NameE-valueIdentityDescription
PP137_ARATH1.453e-1227.73Pentatricopeptide repeat-containing protein At1g80... [more]
PPR21_ARATH1.897e-1220.21Pentatricopeptide repeat-containing protein At1g08... [more]
PP240_ARATH1.897e-1223.71Pentatricopeptide repeat-containing protein At3g18... [more]
PP223_ARATH1.897e-1225.68Putative pentatricopeptide repeat-containing prote... [more]
PP108_ARATH1.897e-1223.49Putative pentatricopeptide repeat-containing prote... [more]
PPR87_ARATH2.478e-1226.82Pentatricopeptide repeat-containing protein At1g61... [more]
PPR84_ARATH2.478e-1223.71Pentatricopeptide repeat-containing protein At1g56... [more]
PP402_ARATH2.478e-1225.44Putative pentatricopeptide repeat-containing prote... [more]
PP311_ARATH3.237e-1223.71Pentatricopeptide repeat-containing protein At4g14... [more]
PP220_ARATH3.237e-1226.40Pentatricopeptide repeat-containing protein At3g09... [more]

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Properties
Property NameValue
Genbank descriptionC02006C04SK IF1 Citrus clementina cDNA clone C02006C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288860 ID=CX288860; Name=CX288860; organism=Citrus clementina; type=EST; length=595bp
AGACAGCAGAGGCTATGGACCTGCTTGATAAGATTCATGAAAAAGGAATA
GACCCCAATACAGTCATGTATAACACAGTATTTTCAGCTCTTGGCAAGTT
GAAGCAAATATCACATCTGCATGATCTTTACCAAAAAATGAAGCAAGATG
GCCCTTCTCCAGATGTATTTACCTACAATATCCTGATTGCAAGCTTTGGT
AGGGCAGGAAAGGTTAATGAGGCCATTAAAGTTTTTGAAGAACTAGAGAA
TAGCAATTGTAAACCTGATATTATCTCATATAATTCATTGATCAATTGTC
TTGGGAAGAATGGTAATCTTGATGAAGCTCACATGAGGTTTAAAGAGATG
CAGGAGAAAGGGTTCAGTCCTGATGTTGTTACATATAGTACGCTAATTGA
ATGCTTTGGCAAGACGGACAAAGTTGAGATGGCATGTAGATTGTTTGACA
AGATGCTTGCTGAAGGATGCTCCCCCAACATTGTGACATACAATATCTTA
CTTGACTGTCTTGAAAGAAGTGGGAGAACTGCTGAAGCAGTGGATCTTTA
TGCAAAACTTAAGCAACAGGGGTTAACACCTGATTCAATCACATA
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