CX288896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 3.598e-41 Identity = 82/161 (50.93%), Postives = 112/161 (69.57%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNV 485 IIGD VGKS LL ++ +F TIGVEF T+ +E+ G+++K QIWDTAGQERFRAVT +YYRGA GAL+VYDITRR+T++ +S WL + + ++ +L+GNK DLE+ R+V+ EE K AE GL F+E SA NV++AF ++IY N+ Sbjct: 16 IIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNI 176
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 4.700e-41 Identity = 81/162 (50.00%), Postives = 119/162 (73.46%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 488 +IGDS VGKS LL R+A + + +TIGV+F+ +++E DGK +K QIWDTAGQERFR +TS+YYRGA G ++VYD+T + +F+++ +WL+E+ ++ V ++LVGNKCDL R VS E GK+LA+ G+ F+ETSA D+TNV+ AF + EI + ++ Sbjct: 13 LIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMA 174
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 4.700e-41 Identity = 76/157 (48.41%), Postives = 114/157 (72.61%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 473 +IGDS VGK+ L R++ + FN +TIG++F+ +++E+DGK +K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +F++I W+ ++ H+ V +M++GNKCD R VS E+G+ LA + G+ FMETSA + N++NAF + R+I Sbjct: 13 LIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDI 169
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 6.138e-41 Identity = 80/162 (49.38%), Postives = 119/162 (73.46%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 488 +IG+S VGKS LL R++ + + +TIGV+F+ +++E+DGK VK QIWDTAGQERFR +TS+YYRG+ G +IVYD+T + +F+ + WL E+ ++ +TV ++LVGNKCDL+ R V + K A+A + F+ETSALDSTNV++AF + R+I ++S Sbjct: 13 LIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMS 174
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 6.138e-41 Identity = 76/157 (48.41%), Postives = 114/157 (72.61%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 473 +IGDS VGKS LL R++ + F P TIG++F+ +++E++GK +K QIWDTAGQERFR +T+AYYRGA+G L+VYD+T +F +I W+ ++ H+ +V +ML+GNKCD+ + V + GKSLA+ G+ F+ETSA +S NV+ AF + ++I Sbjct: 20 LIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDI 176
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.046e-40 Identity = 77/157 (49.04%), Postives = 113/157 (71.97%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 473 +IGDS VGK+ +L R++ + FN +TIG++F+ +++E+DGK +K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +FD+I W+ ++ H+ V +M++GNK D+ R VS E G+ LA G+ FMETSA + NV+NAF + R+I Sbjct: 13 LIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 3.046e-40 Identity = 79/161 (49.07%), Postives = 112/161 (69.57%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNV 485 IIGD+ VGKS LL ++ F P TIGVEF + + ID K +K QIWDTAGQE FR++T +YYRG+ GAL+VYDITRR TF+ ++ WL + ++++++ + +L+GNK D+ES R VS EEG+ A+ GL F+ETSA ++NV+ AF +IY + Sbjct: 10 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKI 170
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.979e-40 Identity = 75/157 (47.77%), Postives = 111/157 (70.70%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 473 +IGDS VGK+ L+ R+A + FN +TIG++F+ +++EI+GK +K Q+WDTAGQERF+ +T+AYYRGA+G ++VYDIT +F++I W+ +K ++ V R+L+GNKCD+E+ R V E+ LA G+ F ETSA S NV AF + R+I Sbjct: 13 LIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDI 169
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.979e-40 Identity = 74/157 (47.13%), Postives = 112/157 (71.34%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 473 +IGDS VGK+ L+ R+A + FN +TIG++F+ ++++I+GK++K Q+WDTAGQERF+ +T+AYYRGA+G ++VYDIT +F++I W+ +K ++ V R+L+GNKCD+E+ R V E+ LA G+ F ETSA S NV AF + R+I Sbjct: 13 LIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.979e-40 Identity = 74/157 (47.13%), Postives = 112/157 (71.34%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 473 +IGDS VGK+ L+ R+A + FN +TIG++F+ ++++I+GK++K Q+WDTAGQERF+ +T+AYYRGA+G ++VYDIT +F++I W+ +K ++ V R+L+GNKCD+E+ R V E+ LA G+ F ETSA S NV AF + R+I Sbjct: 13 LIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169 The following BLAST results are available for this feature:
BLAST of CX288896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288896 ID=CX288896; Name=CX288896; organism=Citrus clementina; type=EST; length=488bpback to top |