CX288905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288905 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.046e-22 Identity = 58/171 (33.92%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 81 QRSKKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFS 593 Q K +RE V KI G N ++ I + + A GI+A+ +E+LA TG +I + + LG +L+E+ + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ V D +++ GG PE+ +A +DE A++ GK+ AIEAF+ Sbjct: 271 QEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKEQLAIEAFA 441
BLAST of CX288905 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.046e-22 Identity = 57/171 (33.33%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 81 QRSKKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFS 593 Q K ++E V ++ G N ++ I + + A AGILA+ IE++A G +I + S LG +L+EE +G++K++ G + +A TI++RG S HV+DE ERSL DA+ V+ + +V+ GGG PE+ +A ++ + A G++ A EAF+ Sbjct: 271 QEEKMLKEMVDRLAEAGANVVFCQKGIDDLAQYYLAKAGILAVRRVKQSDIEKIAKACGAKIITDLREITSADLGEAELVEERKVGDEKMVFIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALKIRDWAPTLGGREQLAAEAFA 441
BLAST of CX288905 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.672e-22 Identity = 58/171 (33.92%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 81 QRSKKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFS 593 Q + +RE V KI G N ++ I + + A GI+A+ +E+LA TG +I + + LG +L+E+ + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ V D ++L GG PE+ +A ++DE A++ GK+ AIEAF+ Sbjct: 271 QEERMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEYAKEVGGKEQLAIEAFA 441
BLAST of CX288905 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22 Identity = 57/171 (33.33%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 81 QRSKKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFS 593 Q K ++E V KI G N ++ I + + A GILA+ +E+LA TG +I + + LG +L+EE + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ + D +++ GGG E+ ++ ++DE A++ GK+ AIEAF+ Sbjct: 271 QEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYAKEVGGKEQLAIEAFA 441
BLAST of CX288905 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.558e-22 Identity = 57/171 (33.33%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 81 QRSKKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFS 593 Q K ++E V KI G N ++ I + + A GILA+ +E+LA TG +I + + LG +L+EE + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ + D +++ GGG E+ ++ ++DE A++ GK+ AIEAF+ Sbjct: 271 QEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKLDEYAKEVGGKEQLAIEAFA 441
BLAST of CX288905 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.558e-22 Identity = 57/171 (33.33%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 81 QRSKKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFS 593 Q K +RE V KI G N ++ I + + A GI+A+ +E+LA TG +I + + LG +L+E+ + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ V D +++ GG PE+ ++ +DE A++ GK+ AIEAF+ Sbjct: 271 QEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYAKEVGGKEQLAIEAFA 441
BLAST of CX288905 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 7.775e-22 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 81 QRSKKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFS 593 + SK +++ V K+ + G N + ++ I + + A GILA+ IE+L G I S+ + LG+ +L+EE +G DK++ G + +A I+LRG++ LDEAERS++DAL L + + +L GGG E+ +A ++ E AR GK+ AIEAF+ Sbjct: 276 EESKYLKDMVDKLASIGANVVICQKGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRVGNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFA 446
BLAST of CX288905 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.015e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 81 QRSKKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFS 593 + SK +++ V K+ + G N + ++ I + + A GILA+ IE+L G I S+ + LG+ +L+EE +G DK++ G + +A I+LRG++ LDEAERS++DAL L + + +L GGG E+ +A ++ E AR GK+ AIEAF+ Sbjct: 276 EESKYLKDMVDKLASIGANVVICQKGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPDDLGYAELVEERRVGNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFA 446
BLAST of CX288905 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21 Identity = 56/171 (32.75%), Postives = 94/171 (54.97%), Query Frame = 3 Query: 81 QRSKKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFS 593 Q K +++ V I G N ++ I + + A GI+A+ +E+LA TG +I + + LG+ +++EE + + +I G + +A TI++RG + HV+DE ER+L DA+ V+ + D VL GG PE+ +A VDE A++ GK++ AIE F+ Sbjct: 271 QEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEIVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAISVDEYAKQVGGKEALAIENFA 441
BLAST of CX288905 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.859e-21 Identity = 52/171 (30.41%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 96 MREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVK------LGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAF 590 ++E+ +KII G N + + + + +AG++ + D + RLA TGG I +T PE + LG C + E +G++ I F G + +I++RGA+ ++DE +RSLHD+LCV+ +T+ V+ GGG E+ ++ ++++ AR K+ A+ F Sbjct: 271 LKERCKKIIEAGANVIITSAGMDDVATKYLVEAGVMGLRRVDKHDLRRLAKATGGTIVTTLATPEGDEVFEASYLGECAEVYEEAVGDNDCIFFKGTKRANCASIIIRGANEFMVDEVDRSLHDSLCVVKRTLESGYVVPGGGAVEIALSIKLEDFARTLGTKEQTAVAEF 441 The following BLAST results are available for this feature:
BLAST of CX288905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288905 ID=CX288905; Name=CX288905; organism=Citrus clementina; type=EST; length=598bpback to top |