CX288913
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 8.847e-20 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R+ DYAR R +AD GA L+ DMAH+SGLVAA +PFE+CH+V+TTTHK+LRG RAGMIFYR Sbjct: 205 YSRNLDYARLRKIADDNGAYLMADMAHVSGLVAAGVVPSPFEHCHVVSTTTHKTLRGCRAGMIFYR 270
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_RABIT (Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus GN=SHMT1 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 1.155e-19 Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R+ DY R R +AD+ GA L+ DMAHISGLV A +PFE+CH+VTTTTHK+LRG RAGMIFYR Sbjct: 205 YSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYR 270
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.971e-19 Identity = 50/90 (55.56%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVKDFEDNNNF 270 Y R DY R R +ADKCGA L+ DMAHISGLVAA +PFEY IVTTTTHKSLRGPR MIF+R + D E+ NF Sbjct: 196 YCRLIDYKRMREIADKCGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGIRSVNQKTGKEIPYDLENPINF 285
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.734e-19 Identity = 45/66 (68.18%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R DY R R + + C A LLCDMAHISGLVAA +PFEY IVTTTTHKSLRGPR MIFYR Sbjct: 197 YARLVDYKRMRKITEMCNAYLLCDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFYR 262
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.734e-19 Identity = 50/90 (55.56%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVKDFEDNNNF 270 Y R DY R R +ADK GA L+ DMAHISGLVAA +PFEY IVTTTTHKSLRGPR MIF+R E + D E NF Sbjct: 196 YCRLIDYKRMREIADKVGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSVHPKTGEEVMYDLEGPINF 285
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 7.489e-19 Identity = 45/66 (68.18%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R DY RFR +A K GA L+ DMAHISGLVAA +PFEY +VTTTTHKSLRGPR MIFYR Sbjct: 235 YARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGAMIFYR 300
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_PARD8 (Serine hydroxymethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.489e-19 Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y RDWDY R R +ADK GALL+ DMAH +GL+AA NP EY HIVT+TTHK+LRGPR G+I Sbjct: 170 YSRDWDYKRMREIADKVGALLMIDMAHPAGLIAAGLLNNPLEYAHIVTSTTHKTLRGPRGGII 232
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_AGRVS (Serine hydroxymethyltransferase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=glyA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.781e-19 Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y R WD+ RFR +AD+ GA L+ DMAHI+GLVA + +PF +CH+ TTTTHKSLRGPR GMI Sbjct: 182 YSRIWDWKRFREIADEVGAYLMVDMAHIAGLVAGNQHPSPFPHCHVATTTTHKSLRGPRGGMI 244
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.277e-18 Identity = 49/89 (55.06%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVKDFEDNNN 267 Y R +DYAR R V DK A+LL DMAHISGLVAA +PF+Y +VTTTTHKSLRGPR MIF+R E + D+ED N Sbjct: 235 YARLYDYARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEVNKQGKE-VLYDYEDKIN 322
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_WOLSU (Serine hydroxymethyltransferase OS=Wolinella succinogenes GN=glyA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.277e-18 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y R+ D+ RFR +AD GALLL D+AH++GL+ A E NPF +CHIVTTTTHK+LRGPR GMI Sbjct: 174 YARELDFKRFREIADSVGALLLGDVAHVAGLIVAGEYPNPFPHCHIVTTTTHKTLRGPRGGMI 236 The following BLAST results are available for this feature:
BLAST of CX288913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288913 ID=CX288913; Name=CX288913; organism=Citrus clementina; type=EST; length=271bpback to top |