CX288913
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.668e-18 Identity = 48/90 (53.33%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVKDFEDNNNF 270 Y R DY R R +ADK GA L+ DMAHISGL+AA +PFEY IVTTTTHKSLRGPR MIF+R + + D E+ NF Sbjct: 197 YCRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSVNPKTGQEILYDLENPINF 286
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.668e-18 Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R DY RFR +A K GA L+ DMAHISGLVAA +PFEY +VTTTTHKSLRGPR +IFYR Sbjct: 231 YARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGALIFYR 296
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_CAMHC (Serine hydroxymethyltransferase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=glyA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.668e-18 Identity = 39/63 (61.90%), Postives = 50/63 (79.37%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR+ D+A+FR +AD GA L D+AHI+GLV A E NPF YCH+V++TTHK+LRGPR G+I Sbjct: 173 YPREIDFAKFREIADSVGAFLFADVAHIAGLVVAGEHTNPFPYCHVVSSTTHKTLRGPRGGII 235
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA1_AGRT5 (Serine hydroxymethyltransferase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glyA1 PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.668e-18 Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y R WD+ RFR +AD+ GA L+ DMAHI+GLVA + +PF +CH+ TTTTHKSLRGPR GMI Sbjct: 182 YSRVWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMI 244
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_AZOPC (Serine hydroxymethyltransferase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=glyA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.179e-18 Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y RDWDY R R +ADK GA+ + DMAH +GL+AAQ NP Y HIVT+TTHK+LRGPR G+I Sbjct: 170 YSRDWDYQRIRLIADKIGAIFMVDMAHPAGLIAAQLLDNPLHYAHIVTSTTHKTLRGPRGGII 232
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_AGRRK (Serine hydroxymethyltransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glyA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.179e-18 Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y R WD+ RFR +AD GA L+ DMAHI+GLVA + +PF +CH+ TTTTHKSLRGPR GMI Sbjct: 184 YSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMI 246
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA1_RHIME (Serine hydroxymethyltransferase 1 OS=Rhizobium meliloti GN=glyA1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.179e-18 Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y R WD+ RFR +AD+ GA L+ DMAHI+GLVA + +PF +CH+ TTTTHKSLRGPR GMI Sbjct: 184 YSRIWDWKRFREIADEVGAWLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMI 246
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.846e-18 Identity = 49/89 (55.06%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVKDFEDNNN 267 Y R +DYAR R V DK A+LL DMAHISGLVAA +PF+Y +VTTTTHKSLRGPR MIF+R E D+ED N Sbjct: 235 YARLYDYARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKE-VFYDYEDKIN 322
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.846e-18 Identity = 48/89 (53.93%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVKDFEDNNN 267 Y R +DYAR R V +K A++L DMAHISGLVAA +PF+Y +VTTTTHKSLRGPR MIF+R E + DFED N Sbjct: 234 YARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE-VLYDFEDKIN 321
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_SPHAL (Serine hydroxymethyltransferase OS=Sphingopyxis alaskensis GN=glyA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.846e-18 Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR D+ARFRA+AD GALL+ DMAH +GLVA +P +Y H+VTTTTHK+LRGPR GMI Sbjct: 190 YPRTLDFARFRAIADDVGALLMVDMAHFAGLVAGGAHPSPMQYAHVVTTTTHKTLRGPRGGMI 252 The following BLAST results are available for this feature:
BLAST of CX288913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288913 ID=CX288913; Name=CX288913; organism=Citrus clementina; type=EST; length=271bpback to top |