CX288913
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17 Identity = 48/89 (53.93%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVKDFEDNNN 267 Y R +DY R R V +K A+LL DMAHISGLVAA +PF+Y +VTTTTHKSLRGPR MIFYR E D+ED N Sbjct: 235 YARLYDYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKE-VFYDYEDKIN 322
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_SYNS3 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain CC9311) GN=glyA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17 Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 YPR D+A FR++AD+ GA LL DMAHI+GLVAA A+P +C +VTTTTHK+LRGPR G+I R Sbjct: 183 YPRSIDFAAFRSIADEVGAYLLADMAHIAGLVAAGVHASPVPHCDVVTTTTHKTLRGPRGGLILCR 248
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_METRJ (Serine hydroxymethyltransferase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=glyA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17 Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR WD+A+FR +AD GA + DMAH +GLVAA +PF + H+ TTTTHK+LRGPR GMI Sbjct: 190 YPRHWDFAKFREIADSVGAYFMVDMAHFAGLVAAGVHPSPFPHAHVATTTTHKTLRGPRGGMI 252
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_HELPG (Serine hydroxymethyltransferase OS=Helicobacter pylori (strain G27) GN=glyA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17 Identity = 37/63 (58.73%), Postives = 52/63 (82.54%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR+ D+ +FR +AD+ GALLL D+AH++GLV E A+PF +CH+V++TTHK+LRGPR G+I Sbjct: 174 YPREIDFKKFREIADEVGALLLGDIAHVAGLVVTNEHAHPFPHCHVVSSTTHKTLRGPRGGII 236
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_BACV8 (Serine hydroxymethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=glyA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17 Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y R+WDY R R +ADK GA+L+ DMAH +GL+AA NP +Y HIVT+TTHK+LRGPR G+I Sbjct: 170 YSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVI 232
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_BACFR (Serine hydroxymethyltransferase OS=Bacteroides fragilis GN=glyA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17 Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y R+WDY R R +ADK GA+L+ DMAH +GL+AA NP +Y HIVT+TTHK+LRGPR G+I Sbjct: 170 YSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVI 232
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_BACFN (Serine hydroxymethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=glyA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17 Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y R+WDY R R +ADK GA+L+ DMAH +GL+AA NP +Y HIVT+TTHK+LRGPR G+I Sbjct: 170 YSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVI 232
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_AMOA5 (Serine hydroxymethyltransferase OS=Amoebophilus asiaticus (strain 5a2) GN=glyA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17 Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y RDWDY R RA+AD+ GALLL D++H +GL++ +P YCH +TTTTHK+LRGPR GMI Sbjct: 170 YSRDWDYKRLRAIADQVGALLLADISHPAGLISRGLLNDPVPYCHFITTTTHKTLRGPRGGMI 232
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_RHIL3 (Serine hydroxymethyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=glyA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.845e-17 Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y R WD+ RFR +AD GA L+ DMAHI+GLVA +PF +CH+ TTTTHKSLRGPR G+I Sbjct: 184 YSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGVHPSPFPHCHVATTTTHKSLRGPRGGVI 246
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_METS4 (Serine hydroxymethyltransferase OS=Methylobacterium sp. (strain 4-46) GN=glyA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.845e-17 Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR WD+A+FR +AD GA+ DMAH +GLVA +PF + H+VTTTTHK+LRGPR GM+ Sbjct: 189 YPRHWDFAKFREIADSVGAVFFVDMAHFAGLVAGGVHPSPFPHAHVVTTTTHKTLRGPRGGMV 251 The following BLAST results are available for this feature:
BLAST of CX288913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288913 ID=CX288913; Name=CX288913; organism=Citrus clementina; type=EST; length=271bpback to top |