CX288913
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_HELPH (Serine hydroxymethyltransferase OS=Helicobacter pylori (strain HPAG1) GN=glyA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.845e-17 Identity = 37/63 (58.73%), Postives = 52/63 (82.54%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR+ D+ +FR +AD+ GALLL D+AH++GLV E A+PF +CH+V++TTHK+LRGPR G+I Sbjct: 174 YPREIDFKKFREIADEVGALLLGDIAHVAGLVVTGEHAHPFPHCHVVSSTTHKTLRGPRGGLI 236
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_CYTH3 (Serine hydroxymethyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=glyA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.845e-17 Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y RDWDYARFR +AD GA+LL D++H +GL+A +P +CHIV+TTTHK+LRGPR G+I Sbjct: 178 YSRDWDYARFRKIADSVGAILLADISHPAGLIAKGLLNDPIPHCHIVSTTTHKTLRGPRGGVI 240
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_BEII9 (Serine hydroxymethyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=glyA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.845e-17 Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR WD+ARFRA+AD GA DMAH +GLVA +PF + H+VT+TTHK+LRGPR G++ Sbjct: 190 YPRHWDFARFRAIADSVGAYFFVDMAHFAGLVAGGAHPSPFPHAHVVTSTTHKTLRGPRGGLV 252
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_SYNPX (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain WH8102) GN=glyA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.409e-17 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 YPR D+A FRA+AD+ GA LL DMAHI+GLVAA +P +C +VTTTTHK+LRGPR G+I R Sbjct: 183 YPRTIDFAAFRAIADEVGAFLLADMAHIAGLVAAGVHPSPVPHCDVVTTTTHKTLRGPRGGLILCR 248
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_SPHWW (Serine hydroxymethyltransferase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=glyA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.409e-17 Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR D+ARFRA+AD+ GAL + DMAH +GLVA PF + H+VTTTTHK+LRGPR GMI Sbjct: 192 YPRHIDFARFRAIADEVGALFMVDMAHFAGLVAGGVHPTPFGHAHVVTTTTHKTLRGPRGGMI 254
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_RICTY (Serine hydroxymethyltransferase OS=Rickettsia typhi GN=glyA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.409e-17 Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR D+ARFR +ADK GA L+ D+AHI+GLVA E +P Y H+VT+TTHK+LRGPR G+I Sbjct: 178 YPRKIDFARFREIADKVGAYLMADIAHIAGLVATGEHQSPIPYAHVVTSTTHKTLRGPRGGLI 240
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_PHEZH (Serine hydroxymethyltransferase OS=Phenylobacterium zucineum (strain HLK1) GN=glyA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.409e-17 Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 Y R D+ +FR +AD+ GA+L+CD+AH +GL+ A E NPF + HIVTTTTHK+LRGPR GMI Sbjct: 187 YSRHIDFKKFREIADEVGAILMCDVAHYAGLIVAGEYPNPFPHAHIVTTTTHKTLRGPRGGMI 249
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_MOOTA (Serine hydroxymethyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=glyA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.409e-17 Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR D+ARFR +AD+ GALL+ DMAHI+GLVAA NP Y H VTTTTHK++RGPR G+I Sbjct: 176 YPRVIDFARFREIADEVGALLMVDMAHIAGLVAAGIHPNPVPYAHFVTTTTHKTMRGPRGGII 238
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_HYPNA (Serine hydroxymethyltransferase OS=Hyphomonas neptunium (strain ATCC 15444) GN=glyA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.409e-17 Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR D+ RFR +AD GA+ L DMAH +GLVA NP ++CHI TTTTHK+LRGPR GMI Sbjct: 190 YPRQIDFKRFREIADDVGAIFLVDMAHFAGLVAGGAHPNPLDHCHIATTTTHKTLRGPRGGMI 252
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYA_HYPME (Serine hydroxymethyltransferase OS=Hyphomicrobium methylovorum GN=glyA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.409e-17 Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMI 189 YPR D+A FRA+AD+ GA+ L DMAH +GLVAA +PF + H+VTTTTHK+LRGPR GMI Sbjct: 190 YPRKIDFAAFRAIADEVGAIFLVDMAHFAGLVAAGLIPSPFPHAHVVTTTTHKTLRGPRGGMI 252 The following BLAST results are available for this feature:
BLAST of CX288913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288913 ID=CX288913; Name=CX288913; organism=Citrus clementina; type=EST; length=271bpback to top |