CX288947
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288947 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.226e-13 Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 3 KFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATGMQEAADSLD 311 ++ VKIP + L AAPLLCAG++++SP+ +FGL AKA G VTV+SS+ K +A++ LGAD +LVS+D M+ A ++D Sbjct: 148 RYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMD 250
BLAST of CX288947 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.085e-13 Identity = 43/109 (39.45%), Postives = 60/109 (55.05%), Query Frame = 3 Query: 3 KFVVKIPDG------MALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATGMQEAADSLD 311 ++VV+IP G L++ APLLCAGVTV+ P+ GL + KA G VTVIS+S K EA+E LGAD +L+S++A M+ AA ++D Sbjct: 142 RYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVTVISTSPWKEAEAVERLGADAFLLSTNAEQMKAAAGTMD 250
BLAST of CX288947 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.770e-12 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 3 KFVVKIPDG--------MALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATGMQEAADSL 308 +FVV+ P + L+ APLLCAGVTV++P+ GL ++ A+A G VTVIS+S KR EA+E LGAD ++VS++A+ M+ A ++ Sbjct: 158 RFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASEMKAAMGTM 267
BLAST of CX288947 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12 Identity = 38/102 (37.25%), Postives = 53/102 (51.96%), Query Frame = 3 Query: 3 KFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATGMQEAADSL 308 ++ KIP L +AAPLLCAG+TV++P+ + Q KA G VTV S+S+ KR EA+ LGAD +++SSD M+ SL Sbjct: 144 RYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMESLKSSL 245
BLAST of CX288947 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.499e-11 Identity = 38/103 (36.89%), Postives = 53/103 (51.46%), Query Frame = 3 Query: 3 KFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATGMQEAADSLD 311 ++ KIP LE AAPLLCAG+TV++P+ + Q KA G VTV S+S K+ EA+ LGA+ +++SSD M+ SLD Sbjct: 145 RYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSLD 247 The following BLAST results are available for this feature:
BLAST of CX288947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288947 ID=CX288947; Name=CX288947; organism=Citrus clementina; type=EST; length=311bpback to top |