CX288956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.201e-18 Identity = 38/110 (34.55%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 98 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELR 424 F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + ++++ D+ DR+++ +R+ELH +++ +L+ Sbjct: 12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQ 121
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL8B_BOVIN (ADP-ribosylation factor-like protein 8B OS=Bos taurus GN=ARL8B PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.159e-17 Identity = 37/110 (33.64%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 98 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELR 424 F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + + +W Y + ++++ D+ DR+++ +R+ELH +++ +L+ Sbjct: 12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFQSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQ 121
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL8A_XENTR (ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis GN=arl8a PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.159e-17 Identity = 39/117 (33.33%), Postives = 72/117 (61.54%), Query Frame = 2 Query: 86 FTKL---FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELR 424 F KL F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ +WD+GGQ + R +W Y + ++++ D+ D+D++ +++ELH +++ +L+ Sbjct: 5 FNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNELHNLLDKAQLQ 121
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL8_DROME (ADP-ribosylation factor-like protein 8 OS=Drosophila melanogaster GN=Gie PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.513e-17 Identity = 37/109 (33.94%), Postives = 67/109 (61.47%), Query Frame = 2 Query: 98 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 F +F K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ VWD+GGQ + R +W Y + ++++ D+ D D++ +R+ELH +++ +L Sbjct: 12 FKSIFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQL 120
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL8A_MOUSE (ADP-ribosylation factor-like protein 8A OS=Mus musculus GN=Arl8a PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.581e-17 Identity = 38/117 (32.48%), Postives = 72/117 (61.54%), Query Frame = 2 Query: 86 FTKL---FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELR 424 F KL F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ +WD+GGQ + R +W Y + ++++ D+ D++++ +++ELH +++ +L+ Sbjct: 5 FNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQ 121
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL8A_HUMAN (ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.581e-17 Identity = 38/117 (32.48%), Postives = 72/117 (61.54%), Query Frame = 2 Query: 86 FTKL---FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELR 424 F KL F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ +WD+GGQ + R +W Y + ++++ D+ D++++ +++ELH +++ +L+ Sbjct: 5 FNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQ 121
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.371e-17 Identity = 38/117 (32.48%), Postives = 72/117 (61.54%), Query Frame = 2 Query: 86 FTKL---FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELR 424 F KL F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ +WD+GGQ + R +W Y + ++++ D+ D++++ +++ELH +++ +L+ Sbjct: 5 FNKLLDWFRALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQ 121
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.403e-17 Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 113 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 A K +IL +GLD AGKTT+L+ LK + T PT+ E + + FT +D+GG + R LW+ YF G++F+ D+ D +R EAR EL +++ +EL Sbjct: 17 AHKNAKILFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEEL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL8B_PONAB (ADP-ribosylation factor-like protein 8B OS=Pongo abelii GN=ARL8B PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.403e-17 Identity = 37/110 (33.64%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 98 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELR 424 F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + ++++ D+ R+++ +R+ELH +++ +L+ Sbjct: 12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAAYREKIEASRNELHNLLDKPQLQ 121
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.510e-17 Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRD 427 K ++L +GLD AGKTT+L+ LK + T PT E + NI FT +D+GG + R LW+ YF G++F+ DS D DR EAR EL + N EL+D Sbjct: 21 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKD 123 The following BLAST results are available for this feature:
BLAST of CX288956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288956 ID=CX288956; Name=CX288956; organism=Citrus clementina; type=EST; length=432bpback to top |