CX288956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL6_CAEBR (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis briggsae GN=arl-6 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.809e-17 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 86 FTKLFSRLFA--KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDEL 394 F S LF KK++ I++VGLD +GKTTIL +LK E + +PT+G V +N+SF +D+ GQ K R W YF ++QG+IFV DS+DR R+ +DEL Sbjct: 3 FLSSLSNLFGMGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRVRMELLKDEL 109
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL6_CAEEL (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis elegans GN=arl-6 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.185e-16 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 86 FTKLFSRLFA--KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDEL 394 F S LF KK++ I++VGLD +GKTTIL +LK E + +PT+G V +N+SF +D+ GQ K R W YF ++QG+IFV DS+DR R+ +DEL Sbjct: 3 FFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDEL 109
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.854e-16 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+ D+ D DR EA+ EL +++ +EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEEL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16 Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRD 427 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LWR YF G++F+ D+ D +R+ E++ EL ++ +EL++ Sbjct: 15 KHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKN 117
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.358e-16 Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRD 427 K ++L +GLD AGKTT+L+ LK + T PT E + NI FT +D+GG + R LW+ YF G++F+ D+ D +R EAR EL + N EL+D Sbjct: 22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKD 124
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.358e-16 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + T PT+ E + N+ FT +D+GG + R LWR YF G++F+ DS D +R E++ EL +++ + L Sbjct: 19 KSAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAELDSLLSIESL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.304e-16 Identity = 37/101 (36.63%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+ D+ D +R+ EA+ E+ +++ +EL Sbjct: 19 KHGKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEEL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_CHAGB (Small COPII coat GTPase SAR1 OS=Chaetomium globosum GN=SAR1 PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 8.304e-16 Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+ D+ D +R EA+ EL +++ +EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSIGNVRFTTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEEL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.304e-16 Identity = 36/70 (51.43%), Postives = 52/70 (74.29%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNT 328 +E+RIL++GLD AGKTT+L +L +I PT GFN+++V+ + VWD+GGQ KIRP W++YF+NT Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENT 85
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.084e-15 Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K +IL +GLD AGKTT+L LK G + + +PT E + NI F +D+GG + R LW+ Y+ + ++++ DS+ +DR VE++ EL +++ DEL Sbjct: 19 KNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDEL 119 The following BLAST results are available for this feature:
BLAST of CX288956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288956 ID=CX288956; Name=CX288956; organism=Citrus clementina; type=EST; length=432bpback to top |