CX288956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARFRP_PONAB (ADP-ribosylation factor-related protein 1 OS=Pongo abelii GN=ARFRP1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.121e-15 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 2 Query: 95 LFSRLFAKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 L+ +F K E IL++GLD AGKTT L YK + L +I TT+ G N+ TV+ WD+GGQ++++ LW Y+ G+I+V DS D +R+ E++ ++V + L Sbjct: 8 LYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEAL 124
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARFRP_HUMAN (ADP-ribosylation factor-related protein 1 OS=Homo sapiens GN=ARFRP1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.121e-15 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 2 Query: 95 LFSRLFAKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 L+ +F K E IL++GLD AGKTT L YK + L +I TT+ G N+ TV+ WD+GGQ++++ LW Y+ G+I+V DS D +R+ E++ ++V + L Sbjct: 8 LYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEAL 124
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_PICST (Small COPII coat GTPase SAR1 OS=Pichia stipitis GN=SAR1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.382e-15 Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + T PT+ E + ++ FT +D+GG + R LW+ YF G++F+ D+ D +R E++ EL + +EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEEL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.382e-15 Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + T PT+ E + ++ FT +D+GG + R LW+ YF G++F+ D+ D +R E++ EL + +EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEEL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_NEOFI (Small COPII coat GTPase sar1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sar1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 9.181e-15 Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + T PT E + N FT +D+GG + R LW+ YF G++F+ D+ D +R E++ EL ++ +EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEEL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 9.181e-15 Identity = 37/103 (35.92%), Postives = 63/103 (61.17%), Query Frame = 2 Query: 113 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 A K+ +++ +GLD AGKTT+L+ LK I +PT+ E + ISFT +D+GG + R +W+ YF ++F+ D D +R+ E+R EL ++ D+++ Sbjct: 18 ANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQI 120
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_ASPFU (Small COPII coat GTPase sar1 OS=Aspergillus fumigatus GN=sar1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 9.181e-15 Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + T PT E + N FT +D+GG + R LW+ YF G++F+ D+ D +R E++ EL ++ +EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEEL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_ASPCL (Small COPII coat GTPase sar1 OS=Aspergillus clavatus GN=sar1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 9.181e-15 Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + T PT E + N FT +D+GG + R LW+ YF G++F+ D+ D +R E++ EL ++ +EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEEL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.045e-14 Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + T PT E + N+ FT +D+GG ++ R +W+ YF G++++ D D +R E+R EL ++ +EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEEL 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.671e-14 Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LWR YF G++++ D D +R+ E++ EL ++ +EL Sbjct: 19 KHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEEL 119 The following BLAST results are available for this feature:
BLAST of CX288956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288956 ID=CX288956; Name=CX288956; organism=Citrus clementina; type=EST; length=432bpback to top |