CX288956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.772e-14 Identity = 33/102 (32.35%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 116 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG + R +W++Y G++F+ D D +R++E+++EL ++ D+ + Sbjct: 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETI 124
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.772e-14 Identity = 33/102 (32.35%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 116 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+ D D R++E++ EL+ ++ D+ + Sbjct: 23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETI 124
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.772e-14 Identity = 33/102 (32.35%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 116 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+ D D R++E++ EL+ ++ D+ + Sbjct: 23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETI 124
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1_YARLI (Small COPII coat GTPase SAR1 OS=Yarrowia lipolytica GN=SAR1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.015e-13 Identity = 35/102 (34.31%), Postives = 60/102 (58.82%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELR 424 K ++L +GLD AGKTT+L+ LK + + PT+ E + N FT +D+GG + R +W+ YF G++F+ D+ D R E++ EL ++ ++L+ Sbjct: 19 KNAKLLFLGLDNAGKTTLLHMLKNDRMAVSNPTVHPTSEELSIGNCKFTTFDLGGHIQARRVWKDYFPEVNGIVFLVDAADPTRFAESKAELDSLLAIEQLK 120
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.015e-13 Identity = 33/102 (32.35%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 116 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG + R +W++Y G++F+ D D +R++E+++EL ++ D+ + Sbjct: 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETI 124
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.015e-13 Identity = 33/100 (33.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 116 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDD 415 KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG + R +W++Y G++F+ D D +R++E+++EL ++ D+ Sbjct: 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDE 122
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.015e-13 Identity = 33/100 (33.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 116 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDD 415 KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG + R +W++Y G++F+ D D +R++E+++EL ++ D+ Sbjct: 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDE 122
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.326e-13 Identity = 33/102 (32.35%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 116 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDEL 421 KK +++ +GLD AGKTT+L LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+ D D R++E++ EL+ ++ D+ + Sbjct: 23 KKSGKLVFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETI 124
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL15_BOVIN (ADP-ribosylation factor-like protein 15 OS=Bos taurus GN=ARL15 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.326e-13 Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 2 Query: 113 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADS-NDRDRVVEARDELHRMVNDDEL 421 A+ E ++ +GL +GKT++L KL + + T GF+++ V ++N V ++GG D IR W Y+Q +QG+IFV DS + D + AR+ELH + +L Sbjct: 29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDSVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLETARNELHSALQHPQL 132
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL15_PONAB (ADP-ribosylation factor-like protein 15 OS=Pongo abelii GN=ARL15 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.731e-13 Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 113 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADS-NDRDRVVEARDELHRMVNDDEL 421 A+ E ++ +GL +GKT++L KL + T GF+++ V ++N V ++GG D IR W Y+Q +QG+IFV DS + D + AR+ELH + +L Sbjct: 29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDNVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELHSALQHPQL 132 The following BLAST results are available for this feature:
BLAST of CX288956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288956 ID=CX288956; Name=CX288956; organism=Citrus clementina; type=EST; length=432bpback to top |