CX288956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARFF_DICDI (ADP-ribosylation factor F OS=Dictyostelium discoideum GN=arrF PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 8.265e-32 Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 2 Query: 86 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDE 418 F +FS K+ +RILM+GLD AGK+T+LYKLK G+++ TIPTIGFNVE +EYKN+S VWD+GGQ+ IR LWR Y Q T IFV DS DR+R E + E+ ++ ++ Sbjct: 13 FVNIFSLFEGKRNIRILMIGLDGAGKSTLLYKLKFGDVIRTIPTIGFNVEIIEYKNLSMNVWDIGGQNNIRALWRQYDQRTDVFIFVVDSTDRERFDEVKQEIKNIIEQNK 123
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARFD_DICDI (ADP-ribosylation factor D OS=Dictyostelium discoideum GN=arrD PE=3 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 1.723e-29 Identity = 54/117 (46.15%), Postives = 90/117 (76.92%), Query Frame = 2 Query: 74 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELR 424 MG++ + FS +F K +++LM+GLD +GKTTILYKL L E+V+TI T+G+NVET+++K+++ T+WD+ G+++IR LW+ ++ +IFV DS+DR R+ EA EL +++ ++EL+ Sbjct: 1 MGISSSNPFSSIFKSKAIKLLMLGLDGSGKTTILYKLMLNEVVSTISTLGYNVETIQHKHLNLTLWDLAGEERIRTLWKPFYNKCTAIIFVVDSSDRLRIDEAASELAKLMKEEELK 117
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL17_HUMAN (ADP-ribosylation factor-like protein 17 OS=Homo sapiens GN=ARL17 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 2.251e-29 Identity = 60/87 (68.97%), Postives = 69/87 (79.31%), Query Frame = 2 Query: 74 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQG 334 MG F KLF L KK+MRIL++ LD AGKTTILYKLKLGE V +PT+GF VETVEYKN +F VWDVG KIRPLW+H+FQNT+G Sbjct: 1 MGNIFEKLFKSLLGKKKMRILILSLDTAGKTTILYKLKLGETVPAVPTVGFCVETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKG 87
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.905e-28 Identity = 57/119 (47.90%), Postives = 85/119 (71.43%), Query Frame = 2 Query: 74 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRDA 430 MG+ FT+++ RLF +E ++++VGLD AGKTTILY+ + E+V T PTIG NVE + N F +WD+GGQ+ +RP W Y+ NT+ +I V DS DR+R+ R+EL++M+ ++LR A Sbjct: 1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKA 118
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 3.250e-28 Identity = 59/119 (49.58%), Postives = 84/119 (70.59%), Query Frame = 2 Query: 74 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRDA 430 MGL F KL+S LF +E ++++VGLD AGKTTILY+ + E+V T PTIG NVE + KN F +WD+GGQ+ +R W Y+ NT+ +I V DS DR+R+ ++EL+RM+ ++LR A Sbjct: 1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKA 118
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.250e-28 Identity = 59/119 (49.58%), Postives = 84/119 (70.59%), Query Frame = 2 Query: 74 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRDA 430 MGL F KL+S LF +E ++++VGLD AGKTTILY+ + E+V T PTIG NVE + KN F +WD+GGQ+ +R W Y+ NT+ +I V DS DR+R+ ++EL+RM+ ++LR A Sbjct: 1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKA 118
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.613e-27 Identity = 56/119 (47.06%), Postives = 84/119 (70.59%), Query Frame = 2 Query: 74 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRDA 430 MG+ FT+++ RLF +E ++++VGLD AGKTTILY+ + E+V T PTIG NVE + N F +WD+GGQ+ +R W Y+ NT+ +I V DS DR+R+ R+EL++M+ ++LR A Sbjct: 1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKA 118
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.613e-27 Identity = 56/119 (47.06%), Postives = 84/119 (70.59%), Query Frame = 2 Query: 74 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRDA 430 MG+ FT+++ RLF +E ++++VGLD AGKTTILY+ + E+V T PTIG NVE + N F +WD+GGQ+ +R W Y+ NT+ +I V DS DR+R+ R+EL++M+ ++LR A Sbjct: 1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKA 118
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.613e-27 Identity = 56/119 (47.06%), Postives = 84/119 (70.59%), Query Frame = 2 Query: 74 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRDA 430 MG+ FT+++ RLF +E ++++VGLD AGKTTILY+ + E+V T PTIG NVE + N F +WD+GGQ+ +R W Y+ NT+ +I V DS DR+R+ R+EL++M+ ++LR A Sbjct: 1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKA 118
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL14_HUMAN (ADP-ribosylation factor-like protein 14 OS=Homo sapiens GN=ARL14 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.329e-26 Identity = 51/104 (49.04%), Postives = 81/104 (77.88%), Query Frame = 2 Query: 119 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRD 427 K+ ++L++GLD+AGK+T+LYKLKL + +TTIPTIGFNVE +E +N S TVWDVGGQ+K+R +W Y +NT GL++V DS D+ R+ E++ + ++ ++ +++ Sbjct: 12 KQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELERNFSLTVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKN 115 The following BLAST results are available for this feature:
BLAST of CX288956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288956 ID=CX288956; Name=CX288956; organism=Citrus clementina; type=EST; length=432bpback to top |