CX288961

Overview
NameCX288961
Unique NameCX288961
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288961 vs. ExPASy Swiss-Prot
Match: KAD_YERPN (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.964e-17
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  225 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 578
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of CX288961 vs. ExPASy Swiss-Prot
Match: KAD_YERPG (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.964e-17
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  225 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 578
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of CX288961 vs. ExPASy Swiss-Prot
Match: KAD_YERPE (Adenylate kinase OS=Yersinia pestis GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.964e-17
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  225 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 578
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of CX288961 vs. ExPASy Swiss-Prot
Match: KAD_YERPB (Adenylate kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.964e-17
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  225 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 578
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of CX288961 vs. ExPASy Swiss-Prot
Match: KAD_YERPA (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.964e-17
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  225 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 578
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of CX288961 vs. ExPASy Swiss-Prot
Match: KAD_YERP3 (Adenylate kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.964e-17
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  225 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 578
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of CX288961 vs. ExPASy Swiss-Prot
Match: KAD_CAMJE (Adenylate kinase OS=Campylobacter jejuni GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.964e-17
Identity = 50/131 (38.17%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  225 LGGPGSGKGTQCANIVEH--FGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDD 599
            +G PGSGK T  + I +      TH S GDLLRAE+ SGSE G  I + I +G +VP +V I  +  A++ +     +IDG+PR+ E    F+ V   + E     V+    SEE  + R+L RN+G +D+
Sbjct:    8 IGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVASGSELGKTIDSFISKGNLVPLDVVINTIVYALKAAPTKTIIIDGYPRSVEQMMEFDKVLSEQNEICLKGVIEVRVSEEVAKERVLGRNRGADDN 138          
BLAST of CX288961 vs. ExPASy Swiss-Prot
Match: KAD_PROAC (Adenylate kinase OS=Propionibacterium acnes GN=adk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.040e-16
Identity = 48/135 (35.56%), Postives = 76/135 (56.30%), Query Frame = 3
Query:  225 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKL-LQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRN--QGREDDNVET 611
            +G PG+GKGTQ   I EH+    +S GD+ R  IK+G+E G  ++ ++  G +VP E+T  + + +  ++   + FL+DG+PRN     A +A  K      + V+  D   E + +R+L R   +GR DDN ET
Sbjct:    6 MGAPGAGKGTQATAIAEHYSVPAISTGDMFRTNIKNGTELGKKVKAIMDAGDLVPDELTDAIVVDRLNQDDAANGFLLDGYPRNMHQVEALDAYLKEHGQRLDAVISLDVDPELLTQRLLKRAEIEGRTDDNEET 140          
BLAST of CX288961 vs. ExPASy Swiss-Prot
Match: KAD_LEPBP (Adenylate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=adk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.040e-16
Identity = 49/135 (36.30%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  225 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NQGREDDNVET 611
            +G PG+GKGTQ   I E +    +S GD+LRA +K+G+  G   +  +  G +VP  V I +++ + +E    + F++DGFPR  E   A   + K   +E + V+  D  +EE+ +R+L R   +GR DDN ET
Sbjct:    7 MGPPGAGKGTQADIIKEKYNIPQISTGDILRAAVKNGTAMGIEAKKYMDAGDLVPDAVVIGIIRDRLVEADCANGFILDGFPRTVEQAKALSEILKELHMELDSVVNLDVPDEELVKRLLGRAIKEGRSDDNEET 141          
BLAST of CX288961 vs. ExPASy Swiss-Prot
Match: KAD_LEPBA (Adenylate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=adk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.040e-16
Identity = 49/135 (36.30%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  225 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NQGREDDNVET 611
            +G PG+GKGTQ   I E +    +S GD+LRA +K+G+  G   +  +  G +VP  V I +++ + +E    + F++DGFPR  E   A   + K   +E + V+  D  +EE+ +R+L R   +GR DDN ET
Sbjct:    7 MGPPGAGKGTQADIIKEKYNIPQISTGDILRAAVKNGTAMGIEAKKYMDAGDLVPDAVVIGIIRDRLVEADCANGFILDGFPRTVEQAKALSEILKELHMELDSVVNLDVPDEELVKRLLGRAIKEGRSDDNEET 141          
The following BLAST results are available for this feature:
BLAST of CX288961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_YERPN7.964e-1740.34Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERPG7.964e-1740.34Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERPE7.964e-1740.34Adenylate kinase OS=Yersinia pestis GN=adk PE=3 SV... [more]
KAD_YERPB7.964e-1740.34Adenylate kinase OS=Yersinia pseudotuberculosis se... [more]
KAD_YERPA7.964e-1740.34Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERP37.964e-1740.34Adenylate kinase OS=Yersinia pseudotuberculosis se... [more]
KAD_CAMJE7.964e-1738.17Adenylate kinase OS=Campylobacter jejuni GN=adk PE... [more]
KAD_PROAC1.040e-1635.56Adenylate kinase OS=Propionibacterium acnes GN=adk... [more]
KAD_LEPBP1.040e-1636.30Adenylate kinase OS=Leptospira biflexa serovar Pat... [more]
KAD_LEPBA1.040e-1636.30Adenylate kinase OS=Leptospira biflexa serovar Pat... [more]

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Properties
Property NameValue
Genbank descriptionC02007D08SK IF1 Citrus clementina cDNA clone C02007D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288961 ID=CX288961; Name=CX288961; organism=Citrus clementina; type=EST; length=613bp
CCCCGGGCTGCAGGAAAAAACTAACATTGGCAATTGGCATCCCTCTGCCT
TCTTTCTTTCCCTCCATATTCTTCTCTCTCTCTCCAAACAAAACAACGCT
CGCAATTCGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGG
GAACTGTGGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTG
AAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGTGGAAAAGG
AACCCAGTGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTG
CTGGTGATCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACC
ATGATTCAGAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCAC
AATTAAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTC
TCATCGATGGTTTTCCCAGAAACGAGGAAAATCGTGCTGCATTTGAAGCT
GTTACCAAAATTGAGCCAGAATTCGTTCTGTTTTTTGACTGTTCTGAGGA
GGAGATGGAGAGGCGCATTTTGAATAGGAATCAGGGAAGAGAAGATGATA
ACGTTGAGACAAT
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