CX288962

Overview
NameCX288962
Unique NameCX288962
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM2_ARATH (Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 PE=1 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 3.050e-52
Identity = 97/148 (65.54%), Postives = 126/148 (85.14%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L   QI+EF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL+LMA+KM++T ++EE+KEAF+VFDK+++GFIS  ELRHVM NLGEK+TDEE+++M K+AD+DGDGQINYEEF ++M+A
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CAM1-1 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 3.050e-52
Identity = 97/148 (65.54%), Postives = 126/148 (85.14%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L   QIAEF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL+LMA+KM++T ++EE+KEAF+VFDK+++GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF ++M+A
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1-1 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 3.050e-52
Identity = 97/148 (65.54%), Postives = 126/148 (85.14%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L   QIAEF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL+LMA+KM++T ++EE+KEAF+VFDK+++GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF ++M+A
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 204.142 bits (518), Expect = 3.984e-52
Identity = 96/148 (64.86%), Postives = 127/148 (85.81%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QI+EF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL+LMA+KM++T ++EE+KEAF+VFDK+++GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF ++M+A
Sbjct:    1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 5.203e-52
Identity = 96/148 (64.86%), Postives = 126/148 (85.14%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L   QI+EF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL+LMA+KM++T ++EE+KEAF+VFDK+++GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF ++M+A
Sbjct:    1 MADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM1_SOLTU (Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 5.203e-52
Identity = 97/148 (65.54%), Postives = 124/148 (83.78%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M + L + QIAEF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI E DA+ NGTI+F EFL+LMA+KM++T ++EE+KEAFKVFDK+++GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQ+NYEEF RMMLA
Sbjct:    1 MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEADADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMMLA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 6.796e-52
Identity = 96/148 (64.86%), Postives = 126/148 (85.14%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L   QI+EF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL+LMA+KM++T ++EE+KEAF+VFDK+++GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF ++M+A
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 203.371 bits (516), Expect = 6.796e-52
Identity = 96/148 (64.86%), Postives = 126/148 (85.14%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L   QI+EF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL+LMA+KM++T ++EE+KEAF+VFDK+++GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF ++M+A
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 6.796e-52
Identity = 96/148 (64.86%), Postives = 126/148 (85.14%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L   QI+EF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL+LMA+KM++T ++EE+KEAF+VFDK+++GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF ++M+A
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 6.796e-52
Identity = 96/148 (64.86%), Postives = 126/148 (85.14%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L   QI+EF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL+LMA+KM++T ++EE+KEAF+VFDK+++GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF ++M+A
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
The following BLAST results are available for this feature:
BLAST of CX288962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 448
Match NameE-valueIdentityDescription
CALM2_ARATH3.050e-5265.54Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 P... [more]
CALM1_ORYSJ3.050e-5265.54Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ORYSI3.050e-5265.54Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1... [more]
CALM_HELAN3.984e-5264.86Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM_MEDSA5.203e-5264.86Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM1_SOLTU5.203e-5265.54Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=... [more]
CALM_LILLO6.796e-5264.86Calmodulin OS=Lilium longiflorum PE=2 SV=2[more]
CALM_EUPCH6.796e-5264.86Calmodulin OS=Euphorbia characias PE=2 SV=4[more]
CALM_BRYDI6.796e-5264.86Calmodulin OS=Bryonia dioica PE=2 SV=2[more]
CALM7_ARATH6.796e-5264.86Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC02007D09SK IF1 Citrus clementina cDNA clone C02007D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288962 ID=CX288962; Name=CX288962; organism=Citrus clementina; type=EST; length=579bp
AGGCTCTCTCTGTCTCTCTCTCTCTGTCTCTGCGTCTCTCTCATTTTTGA
GGGAAAATATTCCAACAATATGGGAGATGTCTTGCCCCAGTATCAGATTG
CTGAGTTTCAAAAAGCTTTTTATTTACTCGACAAGGATGGAGACGGCTGC
ATAACAATCGATGAGTTGGCCGCAGCAATAAGATCATTAGACCAGAATCC
TACCAAAGAAGAGCTCCGACACATGATTGATGAAGTTGATGCCAATGGAA
ATGGAACTATAGAATTTGAGGAGTTTTTGGATCTCATGGCGAAAAAAATG
AGGGAAACTAAAGCTCAAGAGGAAATGAAAGAAGCTTTCAAAGTATTCGA
TAAGAATCGAGACGGTTTCATATCTCCTAATGAGTTGAGACACGTAATGT
TGAATCTTGGAGAGAAAGTGACAGATGAAGAGCTGGAGCAGATGGCTAAA
GATGCTGATTTGGATGGTGATGGTCAAATCAACTATGAAGAATTTTCCAG
AATGATGTTGGCTGCTGTTTGATTATCATAATTAAACTGCGAGTCCCCAT
AATCAAGTTCTGTCATGCAATAACTATCT
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