CX288962

Overview
NameCX288962
Unique NameCX288962
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 9.813e-51
Identity = 94/148 (63.51%), Postives = 125/148 (84.46%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL+LMA+KM++T ++EE+KEAFKVFDK+++G+IS  + RHVM NLGEK+TDEE+++M ++AD+DGDGQ+NYEEF +MM+A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVKMMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_MALDO (Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 9.813e-51
Identity = 95/148 (64.19%), Postives = 125/148 (84.46%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L   QI+EF++AF L DKDGDGCIT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F E L+LMA+KM++T ++EE+KEAF+VFDK+++GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF ++M+A
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEPLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_PROMN (Calmodulin OS=Prorocentrum minimum PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.186e-50
Identity = 96/148 (64.86%), Postives = 122/148 (82.43%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL LMA+KM++T  +EE+ EAFKVFD++ +GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF +MM+A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.186e-50
Identity = 95/148 (64.19%), Postives = 123/148 (83.11%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QI+EF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL +MA+KMR+T ++EE+KEAFKVFDK+ +G+IS  ELRHVM NLGEK+TD E+++M ++AD+DGDGQINYEEF +MML+
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEEFVKMMLS 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_PFIPI (Calmodulin OS=Pfiesteria piscicida PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.186e-50
Identity = 96/148 (64.86%), Postives = 122/148 (82.43%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL LMA+KM++T  +EE+ EAFKVFD++ +GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF +MM+A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 2.186e-50
Identity = 95/148 (64.19%), Postives = 123/148 (83.11%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL +MA+KM++T ++EE+ EAFKVFDK+ +GFIS  ELRH+M NLGEK+TDEE+++M ++AD+DGDGQINYEEF +MM+A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.186e-50
Identity = 96/148 (64.86%), Postives = 122/148 (82.43%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL LMA+KM++T  +EE+ EAFKVFD++ +GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF +MM+A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_ALEFU (Calmodulin OS=Alexandrium fundyense PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.186e-50
Identity = 96/148 (64.86%), Postives = 122/148 (82.43%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL LMA+KM++T  +EE+ EAFKVFD++ +GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQINYEEF +MM+A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMA 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_PLEOS (Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 2.855e-50
Identity = 95/148 (64.19%), Postives = 123/148 (83.11%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QI+EF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL +MA+KMR+T ++EE+KEAFKVFDK+ +G+IS  ELRHVM NLGEK+TD E+++M ++AD+DGDGQINYEEF +MML+
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADVDGDGQINYEEFVKMMLS 148
[Close]
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.729e-50
Identity = 94/148 (63.51%), Postives = 123/148 (83.11%), Query Frame = 1 
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL +MA+KM++T ++EE+ EAFKVFDK+ +GFIS  ELRH+M NLGEK+TDEE+++M ++AD+DGDGQINYEEF +MM++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMS 148
The following BLAST results are available for this feature:
BLAST of CX288962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 448
Match NameE-valueIdentityDescription
CALM_MOUSC9.813e-5163.51Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]
CALM_MALDO9.813e-5164.19Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2[more]
CALM_PROMN2.186e-5064.86Calmodulin OS=Prorocentrum minimum PE=2 SV=1[more]
CALM_PLECO2.186e-5064.19Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]
CALM_PFIPI2.186e-5064.86Calmodulin OS=Pfiesteria piscicida PE=2 SV=1[more]
CALM_MACPY2.186e-5064.19Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]
CALM_KARMI2.186e-5064.86Calmodulin OS=Karlodinium micrum PE=2 SV=1[more]
CALM_ALEFU2.186e-5064.86Calmodulin OS=Alexandrium fundyense PE=2 SV=1[more]
CALM_PLEOS2.855e-5064.19Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=... [more]
CALM_PYTSP3.729e-5063.51Calmodulin OS=Pythium splendens PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC02007D09SK IF1 Citrus clementina cDNA clone C02007D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288962 ID=CX288962; Name=CX288962; organism=Citrus clementina; type=EST; length=579bp
AGGCTCTCTCTGTCTCTCTCTCTCTGTCTCTGCGTCTCTCTCATTTTTGA
GGGAAAATATTCCAACAATATGGGAGATGTCTTGCCCCAGTATCAGATTG
CTGAGTTTCAAAAAGCTTTTTATTTACTCGACAAGGATGGAGACGGCTGC
ATAACAATCGATGAGTTGGCCGCAGCAATAAGATCATTAGACCAGAATCC
TACCAAAGAAGAGCTCCGACACATGATTGATGAAGTTGATGCCAATGGAA
ATGGAACTATAGAATTTGAGGAGTTTTTGGATCTCATGGCGAAAAAAATG
AGGGAAACTAAAGCTCAAGAGGAAATGAAAGAAGCTTTCAAAGTATTCGA
TAAGAATCGAGACGGTTTCATATCTCCTAATGAGTTGAGACACGTAATGT
TGAATCTTGGAGAGAAAGTGACAGATGAAGAGCTGGAGCAGATGGCTAAA
GATGCTGATTTGGATGGTGATGGTCAAATCAACTATGAAGAATTTTCCAG
AATGATGTTGGCTGCTGTTTGATTATCATAATTAAACTGCGAGTCCCCAT
AATCAAGTTCTGTCATGCAATAACTATCT
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