CX288962

Overview
NameCX288962
Unique NameCX288962
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_EPIAK (Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 2.417e-49
Identity = 92/148 (62.16%), Postives = 123/148 (83.11%), Query Frame = 1
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL +MA+KM++T ++EE++EAF+VFDK+ +G+IS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQ+NYEEF ++M A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQIMTA 148          
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 3.157e-49
Identity = 92/146 (63.01%), Postives = 121/146 (82.88%), Query Frame = 1
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMM 507
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL +MA+KM++T ++EE++EAF+VFDK+ +G+IS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQ+NYEEF  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_MYXGL (Calmodulin OS=Myxine glutinosa PE=2 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 3.157e-49
Identity = 92/148 (62.16%), Postives = 123/148 (83.11%), Query Frame = 1
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EV+A+GNGTI+F EFL +MA+KM++T ++EE++EAF+VFDK+ +G+IS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQ+NYEEF +MM A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVNADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148          
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 5.385e-49
Identity = 93/146 (63.70%), Postives = 119/146 (81.51%), Query Frame = 1
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMM 507
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVD +GNGTI+F EFL +MA+KM+ET ++EE++EAF+VFDK+ +GFIS  ELRHVM NLGEK+TDEE+++M ++AD DGDGQ+NYEEF  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMM 146          
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_STRIE (Calmodulin OS=Strongylocentrotus intermedius PE=2 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 5.385e-49
Identity = 92/144 (63.89%), Postives = 120/144 (83.33%), Query Frame = 1
Query:   76 DVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMM 507
            D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL +MA+KM++T ++EE++EAF+VFDK+ +GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQ+NYEEF  MM
Sbjct:   10 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 153          
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 5.385e-49
Identity = 92/146 (63.01%), Postives = 121/146 (82.88%), Query Frame = 1
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMM 507
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+G+GTI+F EFL +MA+KM++T ++EE++EAF+VFDK+ +GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGDGQ+NYEEF  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_PHYPO (Calmodulin OS=Physarum polycephalum PE=2 SV=3)

HSP 1 Score: 193.356 bits (490), Expect = 7.032e-49
Identity = 93/148 (62.84%), Postives = 122/148 (82.43%), Query Frame = 1
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+EVDA+GNGTI+F EFL +MA+KM +T  +EE++EAFKVFDK+ +GFIS  ELRHVM NLGEK++DEE+++M ++AD+DGDGQ+NY+EF +MML+
Sbjct:    1 MVDSLTEEQIAEFKEAFSLFDKDGDGNITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMADTDTEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQVNYDEFVKMMLS 148          
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_PLAFA (Calmodulin OS=Plasmodium falciparum PE=3 SV=4)

HSP 1 Score: 192.971 bits (489), Expect = 9.185e-49
Identity = 90/148 (60.81%), Postives = 122/148 (82.43%), Query Frame = 1
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QI+EF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+E+D +GNGTI+F EFL LMA+K+++T  +EE+ EAF+VFD++ DG+IS +ELRHVM NLGEK+T+EE+++M ++AD+DGDGQINYEEF +MM+A
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIA 148          
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALM_PLAF7 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 9.185e-49
Identity = 90/148 (60.81%), Postives = 122/148 (82.43%), Query Frame = 1
Query:   70 MGDVLPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMMLA 513
            M D L + QI+EF++AF L DKDGDG IT  EL   +RSL QNPT+ EL+ MI+E+D +GNGTI+F EFL LMA+K+++T  +EE+ EAF+VFD++ DG+IS +ELRHVM NLGEK+T+EE+++M ++AD+DGDGQINYEEF +MM+A
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIA 148          
BLAST of CX288962 vs. ExPASy Swiss-Prot
Match: CALMF_NAEGR (Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 9.185e-49
Identity = 93/143 (65.03%), Postives = 117/143 (81.82%), Query Frame = 1
Query:   82 LPQYQIAEFQKAFYLLDKDGDGCITIDELAAAIRSLDQNPTKEELRHMIDEVDANGNGTIEFEEFLDLMAKKMRETKAQEEMKEAFKVFDKNRDGFISPNELRHVMLNLGEKVTDEELEQMAKDADLDGDGQINYEEFSRMML 510
            L + QIAEF++AF L DKDGDG IT  EL   +RSL QNPT+ EL  MI+EVDA+GNGTI+F EFL +MAKKM++T  +EE+KEAFKVFDK+ +GFIS  ELRHVM NLGEK+TDEE+++M ++AD+DGD QINY EF +MM+
Sbjct:   11 LTEEQIAEFKEAFSLFDKDGDGTITTSELGTVMRSLGQNPTEAELHDMINEVDADGNGTIDFTEFLTMMAKKMKDTDNEEEIKEAFKVFDKDGNGFISAQELRHVMCNLGEKLTDEEVDEMIREADIDGDNQINYTEFVKMMM 153          
The following BLAST results are available for this feature:
BLAST of CX288962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 448
Match NameE-valueIdentityDescription
CALM_EPIAK2.417e-4962.16Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3[more]
CALM_STIJA3.157e-4963.01Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]
CALM_MYXGL3.157e-4962.16Calmodulin OS=Myxine glutinosa PE=2 SV=3[more]
CALM_SUBDO5.385e-4963.70Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM_STRIE5.385e-4963.89Calmodulin OS=Strongylocentrotus intermedius PE=2 ... [more]
CALM_PYUSP5.385e-4963.01Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CALM_PHYPO7.032e-4962.84Calmodulin OS=Physarum polycephalum PE=2 SV=3[more]
CALM_PLAFA9.185e-4960.81Calmodulin OS=Plasmodium falciparum PE=3 SV=4[more]
CALM_PLAF79.185e-4960.81Calmodulin OS=Plasmodium falciparum (isolate 3D7) ... [more]
CALMF_NAEGR9.185e-4965.03Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1... [more]

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Properties
Property NameValue
Genbank descriptionC02007D09SK IF1 Citrus clementina cDNA clone C02007D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288962 ID=CX288962; Name=CX288962; organism=Citrus clementina; type=EST; length=579bp
AGGCTCTCTCTGTCTCTCTCTCTCTGTCTCTGCGTCTCTCTCATTTTTGA
GGGAAAATATTCCAACAATATGGGAGATGTCTTGCCCCAGTATCAGATTG
CTGAGTTTCAAAAAGCTTTTTATTTACTCGACAAGGATGGAGACGGCTGC
ATAACAATCGATGAGTTGGCCGCAGCAATAAGATCATTAGACCAGAATCC
TACCAAAGAAGAGCTCCGACACATGATTGATGAAGTTGATGCCAATGGAA
ATGGAACTATAGAATTTGAGGAGTTTTTGGATCTCATGGCGAAAAAAATG
AGGGAAACTAAAGCTCAAGAGGAAATGAAAGAAGCTTTCAAAGTATTCGA
TAAGAATCGAGACGGTTTCATATCTCCTAATGAGTTGAGACACGTAATGT
TGAATCTTGGAGAGAAAGTGACAGATGAAGAGCTGGAGCAGATGGCTAAA
GATGCTGATTTGGATGGTGATGGTCAAATCAACTATGAAGAATTTTCCAG
AATGATGTTGGCTGCTGTTTGATTATCATAATTAAACTGCGAGTCCCCAT
AATCAAGTTCTGTCATGCAATAACTATCT
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