CX288964

Overview
NameCX288964
Unique NameCX288964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length312
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX288964 vs. ExPASy Swiss-Prot
Match: CLPB_TROW8 (Chaperone protein clpB OS=Tropheryma whipplei (strain TW08/27) GN=clpB PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.714e-11
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 2 
Query:  176 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 310
            L++YGTNLTK A   KLDPV+GR  +I RV QIL RRTKNNP LI
Sbjct:    8 LDKYGTNLTKTAATNKLDPVIGRDAEIRRVCQILSRRTKNNPVLI 52
The following BLAST results are available for this feature:
BLAST of CX288964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CLPB_TROW89.714e-1168.89Chaperone protein clpB OS=Tropheryma whipplei (str... [more]

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Properties
Property NameValue
Genbank descriptionC02007D11SK IF1 Citrus clementina cDNA clone C02007D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288964 ID=CX288964; Name=CX288964; organism=Citrus clementina; type=EST; length=312bp
GCATCTTCTCCTTGGGCTTCTTCGTGAAGGGGAAGGTGTAGCAGCTCGTG
TTCTTGAGAATTTAGGTGCTGACCCTAGTAACATCCGCACACAGGTTATT
CGTATGGTTGGTGAGAGCACAGAAGCTGTTGGCGCTGGTGTTGGAGGAGG
AAGCAGTGGCAACAAGATGCCAACACTGGAGGAGTATGGAACAAATTTGA
CTAAGCTAGCAGAGGAGGGAAAATTGGATCCTGTTGTTGGGAGACAGCCA
CAAATAGAGCGTGTTGTCCAAATTTTGGGCCGTCGAACTAAGAATAATCC
ATGTCTTATTGG
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