CX288980

Overview
NameCX288980
Unique NameCX288980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length469
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_HAEIE (Adenylate kinase OS=Haemophilus influenzae (strain PittEE) GN=adk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.462e-14
Identity = 37/83 (44.58%), Postives = 56/83 (67.47%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPR 463
            LG PG+GKGTQ   I+  FG   +S GD+ RA IK+G+E G   + ++ EGK+VP E+T+ L++  + ++   + FL+DGFPR
Sbjct:    6 LGAPGAGKGTQAQFIMNKFGIPQISTGDMFRAAIKAGTELGKQAKALMDEGKLVPDELTVALVKDRIAQADCANGFLLDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CLOD6 (Adenylate kinase OS=Clostridium difficile (strain 630) GN=adk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.462e-14
Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRN 466
            LG PG+GKGTQ   IVE +   H+S GD+ R  IK G+E G   +  + +G +VP E+T+ L+  +  +E   + F++DGFPRN
Sbjct:    6 LGPPGAGKGTQAVGIVEKYNIPHISTGDIFRKNIKEGTELGKKAKEYMDQGLLVPDELTVGLVTDRISQEDCKNGFMLDGFPRN 89          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CITK8 (Adenylate kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=adk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.462e-14
Identity = 37/83 (44.58%), Postives = 56/83 (67.47%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L+ ++  ++   + FL+DGFPR
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIVQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQDDCRNGFLLDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD4_PONAB (Adenylate kinase isoenzyme 4, mitochondrial OS=Pongo abelii GN=AK3L1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.462e-14
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPR 463
            LG PGSGKGT C  I ++FG  HLS+G  LR  IK+ +E G M +  I++  +VP  V  +L+   +E      +L+DGFPR
Sbjct:   11 LGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGEMAKQYIEKSLLVPDHVITRLMMSELENRRGQHWLLDGFPR 92          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD4_HUMAN (Adenylate kinase isoenzyme 4, mitochondrial OS=Homo sapiens GN=AK3L1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.462e-14
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPR 463
            LG PGSGKGT C  I ++FG  HLS+G  LR  IK+ +E G M +  I++  +VP  V  +L+   +E      +L+DGFPR
Sbjct:   11 LGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLLVPDHVITRLMMSELENRRGQHWLLDGFPR 92          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD2_DROWI (Adenylate kinase 2, mitochondrial OS=Drosophila willistoni GN=Adk2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.462e-14
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPR 463
            LG PGSGKGTQ   + E F   HLS GD+LRAEI SGS+ G  ++ ++ EGK+V  E+ + ++   +++    + FL+DGFPR
Sbjct:   24 LGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDEGKLVSDELVVNMIDSNLDKPECKNGFLLDGFPR 106          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_YERE8 (Adenylate kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.828e-14
Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  ++   D FL+DGFPR
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQDDCRDGFLLDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_STRSV (Adenylate kinase OS=Streptococcus sanguinis (strain SK36) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.828e-14
Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPR 463
            +G PG+GKGTQ A IV+HF   H+S GD+ RA I + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR
Sbjct:    6 MGLPGAGKGTQAAKIVDHFNVAHISTGDMFRAAIANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQNDIKETG---FLLDGYPR 89          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CORA7 (Adenylate kinase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.828e-14
Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPR 463
            LG PG+GKGTQ A + E  G  H+S GDL RA I  G+  G   ++ I  GK+VP++VT ++++  + ++   D FL+DGFPR
Sbjct:    6 LGPPGAGKGTQAALLSEKLGVPHISTGDLFRANIGEGTPLGLEAKSYIDAGKLVPTDVTARMVEDRLNQDDAKDGFLLDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_ALKOO (Adenylate kinase OS=Alkaliphilus oremlandii (strain OhILAs) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.828e-14
Identity = 36/83 (43.37%), Postives = 56/83 (67.47%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ A+IVE +   H+S GD+ R  IK G+E G   ++ + +G +VP EV +++++ +  +E   + FL+DGFPR
Sbjct:    6 LGPPGAGKGTQAASIVEKYHIPHISTGDIFRYNIKQGTELGKKAKSYMDQGLLVPDEVVVEIVEDRLKKEDCENGFLLDGFPR 88          
The following BLAST results are available for this feature:
BLAST of CX288980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_HAEIE4.462e-1444.58Adenylate kinase OS=Haemophilus influenzae (strain... [more]
KAD_CLOD64.462e-1442.86Adenylate kinase OS=Clostridium difficile (strain ... [more]
KAD_CITK84.462e-1444.58Adenylate kinase OS=Citrobacter koseri (strain ATC... [more]
KAD4_PONAB4.462e-1443.90Adenylate kinase isoenzyme 4, mitochondrial OS=Pon... [more]
KAD4_HUMAN4.462e-1443.90Adenylate kinase isoenzyme 4, mitochondrial OS=Hom... [more]
KAD2_DROWI4.462e-1445.78Adenylate kinase 2, mitochondrial OS=Drosophila wi... [more]
KAD_YERE85.828e-1444.58Adenylate kinase OS=Yersinia enterocolitica seroty... [more]
KAD_STRSV5.828e-1444.83Adenylate kinase OS=Streptococcus sanguinis (strai... [more]
KAD_CORA75.828e-1444.58Adenylate kinase OS=Corynebacterium aurimucosum (s... [more]
KAD_ALKOO5.828e-1443.37Adenylate kinase OS=Alkaliphilus oremlandii (strai... [more]

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Properties
Property NameValue
Genbank descriptionC02007F04SK IF1 Citrus clementina cDNA clone C02007F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288980 ID=CX288980; Name=CX288980; organism=Citrus clementina; type=EST; length=469bp
CTGCAGGAAAAAACTAACATTGGCAATTGGCATCCCTCTGCCTTCTTTCT
TTCCCTCCATATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCAATT
CGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAACTGT
GGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGAAGC
CCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGCGGAAAAGGAACCCAG
TGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCTGGCGA
TCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTC
AGAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAG
CTTCTTCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCATTGA
TGGTTTTCCCAGAAACGAG
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