CX288980

Overview
NameCX288980
Unique NameCX288980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length469
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_BACV8 (Adenylate kinase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=adk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.036e-15
Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 2
Query:  221 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPR 463
            G PGSGKGTQ   IVE FG  H+S GD+LRAEIK G+E G   +  I +G+++P E+ I +L   ++     K +I DGFPR
Sbjct:    8 GAPGSGKGTQSERIVEKFGINHISTGDVLRAEIKKGTELGKTAKGYIDQGQLLPDELIIDILASTLDSFKESKGVIFDGFPR 89          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_BACTN (Adenylate kinase OS=Bacteroides thetaiotaomicron GN=adk PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.271e-15
Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 2
Query:  221 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPR 463
            G PGSGKGTQ   IVE +G  H+S GD+LRAEIK+G+E G   +  I +G+++P E+ I +L    +   + K +I DGFPR
Sbjct:    8 GAPGSGKGTQSERIVEKYGINHISTGDVLRAEIKNGTELGKTAKGYIDQGQLIPDELMIDILASVFDSFKDSKGVIFDGFPR 89          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_BACGO (Adenylate kinase OS=Bacillus globisporus PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.271e-15
Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPR 463
            +G PG+GKGTQ   IVE +G  H+S GD+ RA I+ G+E G   ++ + +G +VP EVTI ++++ + +S  D  FL+DGFPR
Sbjct:    6 MGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPDEVTIGIVRERLSKSDCDNGFLLDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_BACFR (Adenylate kinase OS=Bacteroides fragilis GN=adk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.884e-15
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2
Query:  221 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPR 463
            G PGSGKGTQ   IVE +G  H+S GD+LRAEIK+G+E G   +  I +G+++P E+ + +L    +   + K +I DGFPR
Sbjct:    8 GAPGSGKGTQSERIVEKYGINHISTGDVLRAEIKNGTELGKTAKGYIDQGQLIPDELMVDILASVFDSFKDSKGVIFDGFPR 89          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_BACFN (Adenylate kinase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=adk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.884e-15
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2
Query:  221 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPR 463
            G PGSGKGTQ   IVE +G  H+S GD+LRAEIK+G+E G   +  I +G+++P E+ + +L    +   + K +I DGFPR
Sbjct:    8 GAPGSGKGTQSERIVEKYGINHISTGDVLRAEIKNGTELGKTAKGYIDQGQLIPDELMVDILASVFDSFKDSKGVIFDGFPR 89          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD4_MOUSE (Adenylate kinase isoenzyme 4, mitochondrial OS=Mus musculus GN=Ak3l1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.884e-15
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPR 463
            LG PGSGKGT C  I ++FG  HLS+G LLR  +K+G+E G + +  +++G +VP  V  +L+   +E      +L+DGFPR
Sbjct:   11 LGPPGSGKGTVCERIAQNFGLQHLSSGHLLRENLKTGTEVGDVAKQYLEKGLLVPDHVITRLMMSELETRSAQHWLLDGFPR 92          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_EXISA (Adenylate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=adk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 8.991e-15
Identity = 37/83 (44.58%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPR 463
            +G PG+GKGTQ A IVE +   H+S GD+ RA IK G+  G   ++ + +G++VP EVTI ++++ + +   +K FL+DGFPR
Sbjct:    6 MGLPGAGKGTQAAKIVEEYQIPHISTGDMFRAAIKGGTPLGKEAKSFMDKGELVPDEVTIGIVRERLSQDDTEKGFLLDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_STRTD (Adenylate kinase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=adk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.174e-14
Identity = 38/84 (45.24%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPR 463
            +G PG+GKGTQ A IVE FG  H+S GD+ RA I + +E G + ++ I +G++VP EVT  ++++ + ES      FL+DG+PR
Sbjct:    6 MGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAIANQTEMGRLAKSFIDKGELVPDEVTNGIVKERLAESDIAEKGFLLDGYPR 89          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_FINM2 (Adenylate kinase OS=Finegoldia magna (strain ATCC 29328) GN=adk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.534e-14
Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   ++E F   H+S GD+ R  IK  +E G  ++ ++ +GK+VP E+TI+++  +  +E   + FL+DGFPR
Sbjct:    6 LGPPGAGKGTQAKRVIEEFDIPHISTGDIFRKNIKEKTELGQKVEGLLAQGKLVPDELTIEIVWDRLDQEDCKNGFLLDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KADC_MAIZE (Adenylate kinase, chloroplastic OS=Zea mays GN=ADK1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.534e-14
Identity = 35/84 (41.67%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  221 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAME--ESGNDKFLIDGFPRN 466
            G P SGKGTQC  I   +   H+SAGDLLRAEI +GSENG   +  +++G++VP E+ + ++++ +   ++  + +L+DG+PR+
Sbjct:   12 GAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLRQPDAQENGWLLDGYPRS 95          
The following BLAST results are available for this feature:
BLAST of CX288980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_BACV84.036e-1548.78Adenylate kinase OS=Bacteroides vulgatus (strain A... [more]
KAD_BACTN5.271e-1547.56Adenylate kinase OS=Bacteroides thetaiotaomicron G... [more]
KAD_BACGO5.271e-1545.78Adenylate kinase OS=Bacillus globisporus PE=1 SV=1[more]
KAD_BACFR6.884e-1546.34Adenylate kinase OS=Bacteroides fragilis GN=adk PE... [more]
KAD_BACFN6.884e-1546.34Adenylate kinase OS=Bacteroides fragilis (strain A... [more]
KAD4_MOUSE6.884e-1543.90Adenylate kinase isoenzyme 4, mitochondrial OS=Mus... [more]
KAD_EXISA8.991e-1544.58Adenylate kinase OS=Exiguobacterium sp. (strain AT... [more]
KAD_STRTD1.174e-1445.24Adenylate kinase OS=Streptococcus thermophilus (st... [more]
KAD_FINM21.534e-1442.17Adenylate kinase OS=Finegoldia magna (strain ATCC ... [more]
KADC_MAIZE1.534e-1441.67Adenylate kinase, chloroplastic OS=Zea mays GN=ADK... [more]

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Properties
Property NameValue
Genbank descriptionC02007F04SK IF1 Citrus clementina cDNA clone C02007F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288980 ID=CX288980; Name=CX288980; organism=Citrus clementina; type=EST; length=469bp
CTGCAGGAAAAAACTAACATTGGCAATTGGCATCCCTCTGCCTTCTTTCT
TTCCCTCCATATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCAATT
CGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAACTGT
GGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGAAGC
CCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGCGGAAAAGGAACCCAG
TGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCTGGCGA
TCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTC
AGAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAG
CTTCTTCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCATTGA
TGGTTTTCCCAGAAACGAG
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