CX288980

Overview
NameCX288980
Unique NameCX288980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length469
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_FRATT (Adenylate kinase OS=Francisella tularensis subsp. tularensis GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 33/83 (39.76%), Postives = 53/83 (63.86%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPR 463
            LG PG+GKGTQ   I + +   H+S GD++R  IKSGS  G  ++ ++  G++V  E  IK+++  + ++  N+ FL+DG PR
Sbjct:    6 LGAPGAGKGTQAKIIEQKYNIAHISTGDMIRETIKSGSALGQELKKVLDAGELVSDEFIIKIVKDRISKNDCNNGFLLDGVPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_FRATN (Adenylate kinase OS=Francisella tularensis subsp. novicida (strain U112) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 33/83 (39.76%), Postives = 53/83 (63.86%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPR 463
            LG PG+GKGTQ   I + +   H+S GD++R  IKSGS  G  ++ ++  G++V  E  IK+++  + ++  N+ FL+DG PR
Sbjct:    6 LGAPGAGKGTQAKIIEQKYNIAHISTGDMIRETIKSGSALGQELKKVLDAGELVSDEFIIKIVKDRISKNDCNNGFLLDGVPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_FRATM (Adenylate kinase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 33/83 (39.76%), Postives = 53/83 (63.86%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPR 463
            LG PG+GKGTQ   I + +   H+S GD++R  IKSGS  G  ++ ++  G++V  E  IK+++  + ++  N+ FL+DG PR
Sbjct:    6 LGAPGAGKGTQAKIIEQKYNIAHISTGDMIRETIKSGSALGQELKKVLDAGELVSDEFIIKIVKDRISKNDCNNGFLLDGVPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_FRAT1 (Adenylate kinase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 33/83 (39.76%), Postives = 53/83 (63.86%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPR 463
            LG PG+GKGTQ   I + +   H+S GD++R  IKSGS  G  ++ ++  G++V  E  IK+++  + ++  N+ FL+DG PR
Sbjct:    6 LGAPGAGKGTQAKIIEQKYNIAHISTGDMIRETIKSGSALGQELKKVLDAGELVSDEFIIKIVKDRISKNDCNNGFLLDGVPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CHRSD (Adenylate kinase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPR 463
            LG PG+GKGTQ   I E F    +S GD+LRA +K GSE G  ++ ++  G +V  ++ I L+++ + +    + FL DGFPR
Sbjct:    6 LGAPGAGKGTQAQFICERFDIPQISTGDMLRAAVKEGSELGLKVKEIMNSGGLVSDDIIIALVKERIAQPDCANGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CHLPN (Adenylate kinase OS=Chlamydia pneumoniae GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPR 463
            +G PGSGKGTQ   +    G  H+S GDLLRA I+ G+ NG   +  + +G  VPS+   ++L++ ++     K  +IDGFPR
Sbjct:   10 MGPPGSGKGTQSQYLANRIGLPHISTGDLLRAIIREGTPNGLKAKAYLDKGAFVPSDFVWEILKEKLQSQACSKGCIIDGFPR 92          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CHLP8 (Adenylate kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPR 463
            LG PG+GKGTQ   I E F    +S GD+LRA +K+ SE G   + ++ EG +VP ++ I L+++ +EE    +  L DGFPR
Sbjct:    6 LGAPGAGKGTQAQYISEAFDIPQISTGDMLRAAVKAQSELGMAAKKVMDEGGLVPDDIIIGLVKERIEEDDCANGCLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CAMJR (Adenylate kinase OS=Campylobacter jejuni (strain RM1221) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEH--FGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN 466
            +G PGSGK T  + I +      TH S GDLLRAE+ SGSE G  I + I +G +VP +V I  +  A++ +     +IDG+PR+
Sbjct:    8 IGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVASGSELGKTIDSFISKGNLVPLDVVINTIVCALKAAPTKTIIIDGYPRS 92          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_AQUAE (Adenylate kinase OS=Aquifex aeolicus GN=adk PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 30/82 (36.59%), Postives = 51/82 (62.20%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   + +  G+ H+S GD+LR  ++ G+  G   +  ++ G++VP ++ I L+++   + GN   + DGFPR
Sbjct:    6 LGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHGN--VIFDGFPR 85          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_ACICJ (Adenylate kinase OS=Acidiphilium cryptum (strain JF-5) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 31/83 (37.35%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPR 463
            LG PG+GKGTQ   + + +G   ++ GD+LRAE+K+G+E G   + +++ G +V  E+ I +L+  + +    + F++DGFPR
Sbjct:    6 LGPPGAGKGTQAKILQDRYGVAQIATGDMLRAEVKAGTELGRAAKAVMESGALVSDEIIIGMLRNRLSQPDCRNGFILDGFPR 88          
The following BLAST results are available for this feature:
BLAST of CX288980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_FRATT1.215e-1139.76Adenylate kinase OS=Francisella tularensis subsp. ... [more]
KAD_FRATN1.215e-1139.76Adenylate kinase OS=Francisella tularensis subsp. ... [more]
KAD_FRATM1.215e-1139.76Adenylate kinase OS=Francisella tularensis subsp. ... [more]
KAD_FRAT11.215e-1139.76Adenylate kinase OS=Francisella tularensis subsp. ... [more]
KAD_CHRSD1.215e-1140.96Adenylate kinase OS=Chromohalobacter salexigens (s... [more]
KAD_CHLPN1.215e-1140.96Adenylate kinase OS=Chlamydia pneumoniae GN=adk PE... [more]
KAD_CHLP81.215e-1143.37Adenylate kinase OS=Chlorobaculum parvum (strain N... [more]
KAD_CAMJR1.215e-1142.35Adenylate kinase OS=Campylobacter jejuni (strain R... [more]
KAD_AQUAE1.215e-1136.59Adenylate kinase OS=Aquifex aeolicus GN=adk PE=1 S... [more]
KAD_ACICJ1.215e-1137.35Adenylate kinase OS=Acidiphilium cryptum (strain J... [more]

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Properties
Property NameValue
Genbank descriptionC02007F04SK IF1 Citrus clementina cDNA clone C02007F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288980 ID=CX288980; Name=CX288980; organism=Citrus clementina; type=EST; length=469bp
CTGCAGGAAAAAACTAACATTGGCAATTGGCATCCCTCTGCCTTCTTTCT
TTCCCTCCATATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCAATT
CGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAACTGT
GGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGAAGC
CCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGCGGAAAAGGAACCCAG
TGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCTGGCGA
TCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTC
AGAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAG
CTTCTTCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCATTGA
TGGTTTTCCCAGAAACGAG
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