CX288980

Overview
NameCX288980
Unique NameCX288980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length469
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_PROM5 (Adenylate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11
Identity = 31/83 (37.35%), Postives = 55/83 (66.27%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN 466
            LG PG+GKGTQ A + E   Y HLS G+LLR EI   +  G  +++++ +G++V  ++ ++++ K + +  N  +++DG+PRN
Sbjct:    8 LGPPGAGKGTQAAYLSEANSYLHLSTGELLRKEIDLDTYLGKQVKDIMNKGELVSDQLVLEIVNKNLSKD-NKGWILDGYPRN 89          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_LEGPL (Adenylate kinase OS=Legionella pneumophila (strain Lens) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11
Identity = 32/83 (38.55%), Postives = 52/83 (62.65%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPR 463
            LGGPG+GKGTQ + ++  +    +S GD+LRA I  G+  G   Q +++ G +V  ++ I L+++ ++    D+ FL DGFPR
Sbjct:    6 LGGPGAGKGTQASLLINRYKIPQISTGDMLRAAIAKGTPLGLSAQKIMESGGLVSDDIIIGLVKERLKNPDCDRGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_LEGPC (Adenylate kinase OS=Legionella pneumophila (strain Corby) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11
Identity = 32/83 (38.55%), Postives = 52/83 (62.65%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPR 463
            LGGPG+GKGTQ + ++  +    +S GD+LRA I  G+  G   Q +++ G +V  ++ I L+++ ++    D+ FL DGFPR
Sbjct:    6 LGGPGAGKGTQASLLINRYKIPQISTGDMLRAAIAKGTPLGLSAQKIMESGGLVSDDIIIGLVKERLKNPDCDRGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_LEGPA (Adenylate kinase OS=Legionella pneumophila (strain Paris) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11
Identity = 32/83 (38.55%), Postives = 52/83 (62.65%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPR 463
            LGGPG+GKGTQ + ++  +    +S GD+LRA I  G+  G   Q +++ G +V  ++ I L+++ ++    D+ FL DGFPR
Sbjct:    6 LGGPGAGKGTQASLLINRYKIPQISTGDMLRAAIAKGTPLGLSAQKIMESGGLVSDDIIIGLVKERLKNPDCDRGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_LACH4 (Adenylate kinase OS=Lactobacillus helveticus (strain DPC 4571) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11
Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPR 463
            LG PG+GKGT    IV+ +  TH+S GD+ R  + + ++ G   ++ I +G +VP EVT KL+++ + +    + F++DGFPR
Sbjct:    7 LGLPGAGKGTASERIVDKYHLTHISTGDMFREAMANKTKVGLEAKSYIDKGNLVPDEVTAKLVEERLSQPDIKEGFILDGFPR 89          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_GEOSM (Adenylate kinase OS=Geobacter sp. (strain M21) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11
Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPR 463
            LG PG GKGTQ   +++ FG   +S GD+LRA +K  +  G   +  +  G +VP EV I ++++ + +    K F++DGFPR
Sbjct:    6 LGPPGVGKGTQAKLLIDRFGIPQISTGDILRAAVKELTPMGAKAKGYMDSGALVPDEVVIGIVEERLAQEDCQKGFILDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CLOK5 (Adenylate kinase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPR 463
            LG PG+GKGTQ   I E +   H+S GD+ R  I   +  G   +  + +G++VP EVTI +++  + E   +  FL+DGFPR
Sbjct:    6 LGPPGAGKGTQAKFISEEYSIPHISTGDIFRKNISDKTPLGIEAKEYLDKGQLVPDEVTINIVKDRLSEDDCESGFLLDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CLOK1 (Adenylate kinase OS=Clostridium kluyveri (strain NBRC 12016) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPR 463
            LG PG+GKGTQ   I E +   H+S GD+ R  I   +  G   +  + +G++VP EVTI +++  + E   +  FL+DGFPR
Sbjct:    6 LGPPGAGKGTQAKFISEEYSIPHISTGDIFRKNISDKTPLGIEAKEYLDKGQLVPDEVTINIVKDRLSEDDCESGFLLDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CAUSK (Adenylate kinase OS=Caulobacter sp. (strain K31) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 2
Query:  221 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPR 463
            G P +GKGTQ   +VE  G   LS GD+LRA I SGSE G  ++ ++  G++V  E+ I L++  + E+      + DGFPR
Sbjct:    7 GPPAAGKGTQAKRLVEQRGMVQLSTGDMLRAAIASGSELGQKVKGVLDRGELVTDEIVIALIEDRLPEAEAAGGAIFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_CAMJD (Adenylate kinase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11
Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEH--FGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN 466
            +G PGSGK T  + I +      TH S GDLLRA++ SGSE G  I + I +G +VP +V +  +  A++ +     +IDG+PR+
Sbjct:    8 IGAPGSGKTTDASLIAQADATNITHYSTGDLLRAQVASGSELGKTIDSFISKGNLVPLDVVVNTIVCALKAAPTKTIIIDGYPRS 92          
The following BLAST results are available for this feature:
BLAST of CX288980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PROM53.536e-1137.35Adenylate kinase OS=Prochlorococcus marinus (strai... [more]
KAD_LEGPL3.536e-1138.55Adenylate kinase OS=Legionella pneumophila (strain... [more]
KAD_LEGPC3.536e-1138.55Adenylate kinase OS=Legionella pneumophila (strain... [more]
KAD_LEGPA3.536e-1138.55Adenylate kinase OS=Legionella pneumophila (strain... [more]
KAD_LACH43.536e-1138.55Adenylate kinase OS=Lactobacillus helveticus (stra... [more]
KAD_GEOSM3.536e-1138.55Adenylate kinase OS=Geobacter sp. (strain M21) GN=... [more]
KAD_CLOK53.536e-1139.76Adenylate kinase OS=Clostridium kluyveri (strain A... [more]
KAD_CLOK13.536e-1139.76Adenylate kinase OS=Clostridium kluyveri (strain N... [more]
KAD_CAUSK3.536e-1141.46Adenylate kinase OS=Caulobacter sp. (strain K31) G... [more]
KAD_CAMJD3.536e-1140.00Adenylate kinase OS=Campylobacter jejuni subsp. do... [more]

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Properties
Property NameValue
Genbank descriptionC02007F04SK IF1 Citrus clementina cDNA clone C02007F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288980 ID=CX288980; Name=CX288980; organism=Citrus clementina; type=EST; length=469bp
CTGCAGGAAAAAACTAACATTGGCAATTGGCATCCCTCTGCCTTCTTTCT
TTCCCTCCATATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCAATT
CGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAACTGT
GGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGAAGC
CCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGCGGAAAAGGAACCCAG
TGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCTGGCGA
TCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTC
AGAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAG
CTTCTTCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCATTGA
TGGTTTTCCCAGAAACGAG
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