CX288980

Overview
NameCX288980
Unique NameCX288980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length469
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_PROMS (Adenylate kinase OS=Prochlorococcus marinus (strain AS9601) GN=adk PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 30/83 (36.14%), Postives = 55/83 (66.27%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN 466
            LG PG+GKGTQ   + +   Y HLS G+LLR EI+  +  G  +++++  G++V  E+ +K++++ + +  N  +++DG+PRN
Sbjct:    8 LGAPGAGKGTQAELLSQTTSYLHLSTGELLRKEIEMNTNLGIQVKDIMNRGELVSDELVLKIVRQNLVKD-NIGWILDGYPRN 89          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_NEIMU (Adenylate kinase OS=Neisseria mucosa GN=adk PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I   FG   +S GD+LRA IK+G+  G   + +I EG +V  ++ I ++ ++  ++   + FL DGFPR
Sbjct:    6 LGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGAPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_NEIMF (Adenylate kinase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=adk PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I   FG   +S GD+LRA IK+G+  G   + +I EG +V  ++ I ++ ++  ++   + FL DGFPR
Sbjct:    6 LGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_NEIME (Adenylate kinase OS=Neisseria meningitidis GN=adk PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I   FG   +S GD+LRA IK+G+  G   + +I EG +V  ++ I ++ ++  ++   + FL DGFPR
Sbjct:    6 LGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_NEIMB (Adenylate kinase OS=Neisseria meningitidis serogroup B GN=adk PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I   FG   +S GD+LRA IK+G+  G   + +I EG +V  ++ I ++ ++  ++   + FL DGFPR
Sbjct:    6 LGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_NEIMA (Adenylate kinase OS=Neisseria meningitidis serogroup A GN=adk PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I   FG   +S GD+LRA IK+G+  G   + +I EG +V  ++ I ++ ++  ++   + FL DGFPR
Sbjct:    6 LGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_NEIM0 (Adenylate kinase OS=Neisseria meningitidis serogroup C (strain 053442) GN=adk PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I   FG   +S GD+LRA IK+G+  G   + +I EG +V  ++ I ++ ++  ++   + FL DGFPR
Sbjct:    6 LGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_NEIGO (Adenylate kinase OS=Neisseria gonorrhoeae GN=adk PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I   FG   +S GD+LRA IK+G+  G   + +I EG +V  ++ I ++ ++  ++   + FL DGFPR
Sbjct:    6 LGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_NEIG2 (Adenylate kinase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=adk PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I   FG   +S GD+LRA IK+G+  G   + +I EG +V  ++ I ++ ++  ++   + FL DGFPR
Sbjct:    6 LGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPR 88          
BLAST of CX288980 vs. ExPASy Swiss-Prot
Match: KAD_NEIG1 (Adenylate kinase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=adk PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  218 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPR 463
            LG PG+GKGTQ   I   FG   +S GD+LRA IK+G+  G   + +I EG +V  ++ I ++ ++  ++   + FL DGFPR
Sbjct:    6 LGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPR 88          
The following BLAST results are available for this feature:
BLAST of CX288980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PROMS4.618e-1136.14Adenylate kinase OS=Prochlorococcus marinus (strai... [more]
KAD_NEIMU4.618e-1140.96Adenylate kinase OS=Neisseria mucosa GN=adk PE=3 S... [more]
KAD_NEIMF4.618e-1140.96Adenylate kinase OS=Neisseria meningitidis serogro... [more]
KAD_NEIME4.618e-1140.96Adenylate kinase OS=Neisseria meningitidis GN=adk ... [more]
KAD_NEIMB4.618e-1140.96Adenylate kinase OS=Neisseria meningitidis serogro... [more]
KAD_NEIMA4.618e-1140.96Adenylate kinase OS=Neisseria meningitidis serogro... [more]
KAD_NEIM04.618e-1140.96Adenylate kinase OS=Neisseria meningitidis serogro... [more]
KAD_NEIGO4.618e-1140.96Adenylate kinase OS=Neisseria gonorrhoeae GN=adk P... [more]
KAD_NEIG24.618e-1140.96Adenylate kinase OS=Neisseria gonorrhoeae (strain ... [more]
KAD_NEIG14.618e-1140.96Adenylate kinase OS=Neisseria gonorrhoeae (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC02007F04SK IF1 Citrus clementina cDNA clone C02007F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288980 ID=CX288980; Name=CX288980; organism=Citrus clementina; type=EST; length=469bp
CTGCAGGAAAAAACTAACATTGGCAATTGGCATCCCTCTGCCTTCTTTCT
TTCCCTCCATATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCAATT
CGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAACTGT
GGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGAAGC
CCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGCGGAAAAGGAACCCAG
TGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCTGGCGA
TCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTC
AGAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAG
CTTCTTCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCATTGA
TGGTTTTCCCAGAAACGAG
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