CX288992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288992 vs. ExPASy Swiss-Prot
Match: TPSD1_PICAB (Levopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-LAS PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.533e-16 Identity = 55/187 (29.41%), Postives = 92/187 (49.20%), Query Frame = 1 Query: 1 LHYAKEAMKNQVKHYFFEAKWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGMGDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYINQY-GATEEEAYSEFRKQVSNAWKDINEECLRPTLVPVPLLMRILNLTRAADVVYKYKDGYT--DTEELKDFIASLLINPV 552 L Y + + Q++ Y EA+W YVP+ DEY+ A +S A + IS + G+I+T + + R ++ GRL+ND +++ E+ +G VAS+V+CY+ + +EEEA + NA ++N E + VP + R + Y DG T E+K+ + + L PV Sbjct: 672 LGYIRNVWEIQLEAYTKEAEWSAARYVPSFDEYIDNASVSIALGTVVLISALFTGEILTDDVLSKIGRGSRFLQLMGLTGRLVNDTKTYEAERGQGEVASAVQCYMKDHPEISEEEALKHVYTVMENALDELNREFVNNREVPDSCRRLVFETARIMQLFYMDGDGLTLSHETEIKEHVKNCLFQPV 858
BLAST of CX288992 vs. ExPASy Swiss-Prot
Match: TPSDV_ABIGR (Abietadiene synthase, chloroplastic OS=Abies grandis GN=ag22 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.626e-16 Identity = 53/187 (28.34%), Postives = 94/187 (50.27%), Query Frame = 1 Query: 1 LHYAKEAMKNQVKHYFFEAKWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGMGDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYINQY-GATEEEAYSEFRKQVSNAWKDINEECLRPTLVPVPLLMRILNLTRAADVVYKYKDGYTDTE--ELKDFIASLLINPV 552 L Y + K Q++ Y EA+W YVP+ +EY+ A +S A + IS + G+++T E + R ++ GRL+ND +++ E+ +G VAS+++CY+ + +EEEA + NA +++N E + +P + R + Y DG T + E+K+ + + L PV Sbjct: 682 LGYIQNVWKVQLEAYTKEAEWSEAKYVPSFNEYIENASVSIALGTVVLISALFTGEVLTDEVLSKIDRESRFLQLMGLTGRLVNDTKTYQAERGQGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVN-NKIPDIYKRLVFETARIMQLFYMQGDGLTLSHDMEIKEHVKNCLFQPV 867
BLAST of CX288992 vs. ExPASy Swiss-Prot
Match: TPSD1_PINTA (Levopimaradiene synthase, chloroplastic OS=Pinus taeda GN=LPS PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.626e-16 Identity = 55/187 (29.41%), Postives = 93/187 (49.73%), Query Frame = 1 Query: 1 LHYAKEAMKNQVKHYFFEAKWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGMGDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYINQY-GATEEEAYSEFRKQVSNAWKDINEECLRPTLVPVPLLMRILNLTRAADVVYKYKDGYT--DTEELKDFIASLLINPV 552 L Y ++ + Q++ Y EA+W YVP+ DEY+ A +S A + IS + G+I+T + + + R + GRL+ND +++ E+ +G VAS+V+CY+ + +EEEA + NA ++N E + VP + R + Y DG T E+K+ + + L PV Sbjct: 663 LSYIQKVWEVQLEAYTKEAEWSAVRYVPSYDEYIGNASVSIALGTVVLISALFTGEILTDDILSKIGRDSRFLYLMGLTGRLVNDTKTYQAERGQGEVASAVQCYMKDHPEISEEEALKHVYTIMDNALDELNREFVNNRDVPDTCRRLVFETARIMQLFYMDGDGLTLSHNMEIKEHVKNCLFQPV 849
BLAST of CX288992 vs. ExPASy Swiss-Prot
Match: TASY_TAXCH (Taxadiene synthase OS=Taxus chinensis GN=TDC1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.626e-16 Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 1 Query: 43 YFFEAKWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGMGDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYI-NQYGATEEEAYSEFRKQVSNAWKDINEECLRPTL-VPVPLLMRILNLTRAADVVYKYKDGY-TDTEELKDFIASLLINPVPI 558 Y E +W Y+PT +EY+ IS + + MG++V + E + RL ND +++ E++RG AS + CY+ + GATEE+A + V A K+ + E +P+ +P+ I NL + YK+ DGY EE+KD+I + I+P+ + Sbjct: 688 YVQEREWLDAGYIPTFEEYLKTYAISVGLGPCTLQPILLMGELVKDDVVEKVHYPSNMFELVSLSWRLTNDTKTYQAEKARGQQASGIACYMKDNLGATEEDAIKHICRVVDRALKEASFEYFKPSNDIPMGCKSFIFNLRLCVQIFYKFIDGYGIANEEIKDYIRKVYIDPIQV 862
BLAST of CX288992 vs. ExPASy Swiss-Prot
Match: TASY_TAXBR (Taxadiene synthase OS=Taxus brevifolia GN=TDC1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.257e-15 Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 1 Query: 43 YFFEAKWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGMGDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYI-NQYGATEEEAYSEFRKQVSNAWKDINEECLRPTL-VPVPLLMRILNLTRAADVVYKYKDGY-TDTEELKDFIASLLINPVPI 558 Y E +W Y+PT +EY+ IS + + MG++V + E + RL ND +++ E++RG AS + CY+ + GATEE+A + V A K+ + E +P+ +P+ I NL + YK+ DGY EE+KD+I + I+P+ + Sbjct: 688 YVQEREWLEAGYIPTFEEYLKTYAISVGLGPCTLQPILLMGELVKDDVVEKVHYPSNMFELVSLSWRLTNDTKTYQAEKARGQQASGIACYMKDNPGATEEDAIKHICRVVDRALKEASFEYFKPSNDIPMGCKSFIFNLRLCVQIFYKFIDGYGIANEEIKDYIRKVYIDPIQV 862
BLAST of CX288992 vs. ExPASy Swiss-Prot
Match: TASY_TAXBA (Taxadiene synthase OS=Taxus baccata GN=TDC1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.257e-15 Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 1 Query: 43 YFFEAKWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGMGDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYI-NQYGATEEEAYSEFRKQVSNAWKDINEECLRPTL-VPVPLLMRILNLTRAADVVYKYKDGY-TDTEELKDFIASLLINPVPI 558 Y E +W Y+PT +EY+ IS + + MG++V + E + RL ND +++ E++RG AS + CY+ + GATEE+A + V A K+ + E +P+ +P+ I NL + YK+ DGY EE+KD+I + I+P+ + Sbjct: 688 YVQEREWLEAGYIPTFEEYLKTYAISVGLGPCTLQPILLMGELVKDDVVEKVHYPSNMFELVSLSWRLTNDTKTYQAEKARGQQASGIACYMKDNPGATEEDAIKHICRVVDRALKEASFEYFKPSNDIPMGCKSFIFNLRLCVQIFYKFIDGYGIANEEIKDYIRKVYIDPIQV 862
BLAST of CX288992 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.642e-15 Identity = 48/184 (26.09%), Postives = 95/184 (51.63%), Query Frame = 1 Query: 13 KEAMKNQVKHYFFEAKWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGMGDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYINQY-GATEEEAYSEFRKQVSNAWKDINEECLRPTLVPVPLLMRILNLTRAADVVYKYKDG-YTDTEELKDFIASLLINPVPI 558 K+ K ++ Y EA+W ++PT +EY+ + SS L+ + + ++ E + S + + GR+ +D+ + E+ RG +ASS++CY+ + +T E A + + ++ + ++ N E ++ VP+ N+ R +YKY+DG Y +E+KD I +L++ VP+ Sbjct: 396 KDCWKRYIESYLQEAEWIATGHIPTFNEYIKNGMASSGMCILNLNPLLLLDKLLPDNILEQIHSPSKILDLLELTGRIADDLKDFEDEKERGEMASSLQCYMKENPESTVENALNHIKGILNRSLEEFNWEFMKQDSVPMCCKKFTFNIGRGLQFIYKYRDGLYISDKEVKDQIFKILVHQVPM 579
BLAST of CX288992 vs. ExPASy Swiss-Prot
Match: TPSD2_PICAB (Isopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-ISO PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.144e-15 Identity = 53/187 (28.34%), Postives = 93/187 (49.73%), Query Frame = 1 Query: 1 LHYAKEAMKNQVKHYFFEAKWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGMGDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYINQY-GATEEEAYSEFRKQVSNAWKDINEECLRPTLVPVPLLMRILNLTRAADVVYKYKDGYTDTE--ELKDFIASLLINPV 552 L Y + ++ + + EA+W YVP+ DEY+ A +S + L IS + G+I+T + + R ++ GRL+ND +++ E+ +G VAS+V+CY+ ++ +EEEA + NA ++N E + VP + R + Y DG T + E+K+ + + L PV Sbjct: 680 LGYIRNVLEILLAAHTKEAEWSAARYVPSFDEYIENASVSISLGTLVLISVLFTGEILTDDVLSKIGRGSRFLQLMGLTGRLVNDTKTYEAERGQGEVASAVQCYMKEHPEISEEEALKHVYTVMENALDELNREFVNNRDVPDSCRRLVFETARIMQLFYMEGDGLTLSHEMEIKEHVKNCLFQPV 866
BLAST of CX288992 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.144e-15 Identity = 51/186 (27.42%), Postives = 90/186 (48.39%), Query Frame = 1 Query: 7 YAKEAMKNQVKHYFFEAKWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGMGDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYINQYGATEEEAYSEFRKQVSNAWKDINEECLRPTLVPVP----LLMRILNLTRAADVVYKYKDGY-TDTEELKDFIASLLINP 549 Y + + + V+ Y EA WY+ Y P+++EY+ A IS + P + + + + + + + + E L+ + S + RL +D+ + + E RG V +++CY+N A+E EA + + AWK++N T P L+ NL RAA +Y DG+ E+ + LL P Sbjct: 406 YLQRSWVSLVEGYLKEAYWYYNGYKPSLEEYLNNAKISISAPTIISQLYFTLANSIDETAIESLYQYHNILYLSGTILRLADDLGTSQHELERGDVPKAIQCYMNDTNASEREAVEHVKFLIREAWKEMNTV---TTASDCPFTDDLVAAAANLARAAQFIYLDGDGHGVQHSEIHQQMGGLLFQP 588
BLAST of CX288992 vs. ExPASy Swiss-Prot
Match: GBIS1_ARATH ((Z)-gamma-bisabolene synthase 1 OS=Arabidopsis thaliana GN=TPS12 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.144e-15 Identity = 54/167 (32.34%), Postives = 88/167 (52.69%), Query Frame = 1 Query: 58 KWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGMGDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYINQYGATEEEAYSEFRKQVSNAWKDINEECLRPTLVPVPLLMRILNLTRAADVVY-KYKDGYTDTE-ELKDFIASLLINPV 552 KW VP+ +E++ V I+ SFVGMG+ KE++EW+F +S + S G A+++ Y+ Q+ T+EEA E ++ + + K INEE L+ T VP +L + LN R +++Y K D Y +E +LK++I +LLI+P+ Sbjct: 386 KWARGIQVPSFEEHVEVGGIALTSYATLMYSFVGMGETAGKEAYEWVFLYCQS-------------------DMSNGFAANAINYYMKQFVVTKEEAILECQRMIVDINKTINEELLKTTSVPGRVLKQALNFGRLLELLYTKSDDIYNCSEGKLKEYIVTLLIDPI 533 The following BLAST results are available for this feature:
BLAST of CX288992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288992 ID=CX288992; Name=CX288992; organism=Citrus clementina; type=EST; length=640bpback to top |