CX288997

Overview
NameCX288997
Unique NameCX288997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL44_ARATH (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana GN=At2g31550 PE=2 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 2.978e-33
Identity = 74/180 (41.11%), Postives = 102/180 (56.67%), Query Frame = 2
Query:    5 AGSNDIDNTYFASRVRKLQYD-ISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKT-RDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSL 538
            AG ND    Y+    R+L+Y  IS Y D I+     F +ELY LGVR + V   PP+GCLP   T       R C   +N+ + ++N KL   L  +    P ++ L  D+YNP++ +IQNP KYGF+   +GCCGTG LE S  CN FS   C N S ++F+D  HP+E TY ++ + L
Sbjct:  172 AGPNDFILNYYDIPSRRLEYPFISGYQDFILKRLENFVRELYSLGVRNVLVGGLPPMGCLPIHMTAKFRNIFRFCLEHHNKDSVLYNEKLQKLLPQIEASLPGSKFLYADVYNPMMEMIQNPSKYGFKETKRGCCGTGFLETSFMCNVFS-PVCQNRSEFMFFDSIHPSEATYNVIGNRL 350          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL56_ARATH (GDSL esterase/lipase At3g43570 OS=Arabidopsis thaliana GN=At3g43570 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.293e-32
Identity = 72/182 (39.56%), Postives = 106/182 (58.24%), Query Frame = 2
Query:    2 VAGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINK 547
            V+ SND+ +TY A   R   YD ++Y + +   A  F +EL+ LG +++GVFSA P+GC+P  RT+ G K                     ELD +        +L I++Y+ L  +IQ+P KYGFEV ++GCCG G L  S  CN  +  TC+N S YIFWD YHP++R Y+++V +L++K
Sbjct:  165 VSSSNDLAHTYLAQAHR---YDRTSYANFLADSAVHFVRELHKLGAQKIGVFSAVPVGCVPLQRTVFGDK---------------------ELDGV--------ILYINVYDTLFDMIQHPKKYGFEVADRGCCGKGLLTISYLCNSLNQFTCSNSSAYIFWDSYHPSKRAYQVIVDNLLDK 314          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL5_ARATH (GDSL esterase/lipase At1g23500 OS=Arabidopsis thaliana GN=At1g23500 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.807e-30
Identity = 72/182 (39.56%), Postives = 96/182 (52.75%), Query Frame = 2
Query:    5 AGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINKI 550
            AG+ND+  TY        QY +S YTDL+V       K LY +G R+  V    PLGCLP +R  GG     C    N+ A +FN KLSA+L++L+   P A+ + +D+YNPLL LI NP   GF  V  GCC          C   S   C + S Y+FWD  HP+E++Y  +   +I  I
Sbjct:  172 AGNNDLAITY---PTLMAQYTVSTYTDLLVTWTDNLLKSLYAMGARKFAVLGTLPLGCLPGARHTGGNFGNICLVPINQVAAIFNQKLSAKLNNLHTILPGAKFVYVDMYNPLLNLINNPRASGFIDVADGCC----------CMPTSPVPCPDASQYVFWDFAHPSEKSYMTIAPKIIEGI 340          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL41_ARATH (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana GN=At2g30220 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.807e-30
Identity = 69/179 (38.55%), Postives = 98/179 (54.75%), Query Frame = 2
Query:    5 AGSNDIDNTYFASRVRKLQYD-ISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRD----CANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKIL 526
            AG ND    ++   +R+L+Y  I  Y D ++     F +ELY LG R + V   PP+GCLP   T    K R     C    N+ + ++N KL  +L  +    P ++ L  ++Y+P++ +I+NP KYGF+   KGCCGTG LE S  C   S  TC N S ++FWD  HP+E  YK L
Sbjct:  170 AGPNDFILNFYDIPIRRLEYPTIYGYQDFVLKRLDGFVRELYSLGCRNILVGGLPPMGCLPIQLT---AKLRTILGICVEQENKDSILYNQKLVKKLPEIQASLPGSKFLYANVYDPVMDMIRNPSKYGFKETKKGCCGTGYLETSFLCTSLS-KTCPNHSDHLFWDSIHPSEAAYKYL 344          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL23_ARATH (GDSL esterase/lipase At1g58430 OS=Arabidopsis thaliana GN=At1g58430 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.807e-30
Identity = 71/184 (38.59%), Postives = 101/184 (54.89%), Query Frame = 2
Query:    5 AGSND-IDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKT-RDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINKI 550
            AG ND I N Y     R++   IS Y D ++   + F KELY LG R++ V   PP+GCLP   T       R C    N  + ++N KL   L         +++L  D+Y+P++ ++QNP KYGF+   +GCCGTG LE S  CN +S + C N S ++F+D  HP+E TY  + + L  KI
Sbjct:  172 AGPNDFILNYYEVPSWRRMYPSISDYQDFVLSRLNNFVKELYSLGCRKILVGGLPPMGCLPIQMTAQFRNVLRFCLEQENRDSVLYNQKLQKLLPQTQASLTGSKILYSDVYDPMMEMLQNPSKYGFKETTRGCCGTGFLETSFMCNAYS-SMCQNRSEFLFFDSIHPSEATYNYIGNVLDTKI 354          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.082e-30
Identity = 62/185 (33.51%), Postives = 95/185 (51.35%), Query Frame = 2
Query:    8 GSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINKIANGF 562
            G+ND    Y+    R+ Q+ IS Y D +V +A  F K++Y LG R+M      P+GCLP  R         CA  YN+ A  FN +L   +  LN +    ++   + Y+ +  ++  P  YG E+ +  CCGTG  E    C Q +  TC++ + ++FWD +HPTERT +I+       + N F
Sbjct:  165 GTNDFLENYYTLPDRRSQFSISQYQDFLVEIAEVFLKDIYRLGARKMSFTGISPMGCLPLERVTNLDDPFSCARSYNDLAVDFNGRLRRLVTKLNRELTGIKIYFANPYDIMWDIVTKPNLYGLEISSSACCGTGLFEMGFLCGQDNPLTCSDANKFVFWDAFHPTERTNQIVSDHFFKHLKNLF 349          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL39_ARATH (GDSL esterase/lipase At2g24560 OS=Arabidopsis thaliana GN=At2g24560 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.082e-30
Identity = 69/184 (37.50%), Postives = 102/184 (55.43%), Query Frame = 2
Query:    5 AGSNDIDNTYFASRVRKLQYD-ISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLG-GGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINKI 550
            AG ND    Y+    R+L++  IS Y D ++     F +ELY LG R++ V   PP+GCLP   T       R C    N  + ++N KL   L  +      +++L  ++Y+P++ ++QNP KYGF+   +GCCGTG LE S  CN FS  TC N S ++F+D  HP+E TY  + + L  +I
Sbjct:  171 AGPNDFILNYYDIPSRRLEFPHISGYQDFVLQRLDNFVRELYSLGCRKIMVGGLPPMGCLPIQMTAKFRNALRFCLEQENRDSVLYNQKLQNLLPQIEASLTGSKILYSNVYDPMMDMMQNPSKYGFKETKRGCCGTGHLETSFMCNAFS-PTCRNHSEFLFFDSIHPSEATYNYMGNFLDTQI 353          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.026e-30
Identity = 67/176 (38.07%), Postives = 95/176 (53.98%), Query Frame = 2
Query:    5 AGSNDIDNTYFASRVRKLQYD-ISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKT-RDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKIL 526
            AG ND    ++    R+L+Y  I  Y + I+     F +ELY LG R + V   PP+GCLP   T       R C    N+ + ++N KL  +L  +    P +  L  ++Y+PL+ +IQNP KYGF+   KGCCGTG LE +  CN  +  TC N S ++FWD  HP+E  Y  +
Sbjct:  171 AGPNDFILNFYDIPTRRLEYPTIHGYQEFILKRLDGFVRELYSLGCRNIVVGGLPPMGCLPIQMTAKMRNILRFCVEQENKDSVLYNQKLVKKLPEIQASLPGSNFLYANVYDPLMDMIQNPSKYGFKETKKGCCGTGYLETTFMCNPLT-KTCPNHSDHLFWDSIHPSEAAYNYI 345          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.915e-29
Identity = 67/183 (36.61%), Postives = 101/183 (55.19%), Query Frame = 2
Query:    5 AGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKT---RDCANDYNEAAQMFNTKLSAELDSLNIQFPD--ARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSL 538
            AG+ND    YF   +R+  + I AY   ++     F + L+  G R++ V   PP+GCLP   TL  G+    R C + ++  A  +N  L  +L  + +      +++  +D+YNP+  +I++P K+GFE V  GCCG+G LEAS  CN  S   C N S Y+F+D  HP+E+TY  L  SL
Sbjct:  183 AGTNDFVINYFTIPIRRKTFTIEAYQQFVISNLKQFIQGLWKEGARKITVAGLPPIGCLPIVITLFSGEALTNRRCIDRFSTVATNYNFLLQKQLALMQVGLAHLGSKIFYLDVYNPVYEVIRDPRKFGFEEVFSGCCGSGYLEASFLCNPKSY-VCPNTSAYVFFDSIHPSEKTYFSLFRSL 364          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.209e-28
Identity = 59/178 (33.15%), Postives = 98/178 (55.06%), Query Frame = 2
Query:    8 GSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLI 541
            G+ND    Y+    +  +Y ++ Y   ++G+A+ F  ++Y LG R+M +    P GCLP  RT        C  +YN  A+ FN K+  ++  LN      +L+  + Y+ +  +I +P  +GFE V   CCGTG  E S  C++ +  TC++ S Y+FWD +HPTE+T  I+ + ++
Sbjct:  166 GTNDFLENYYLLPRKLRKYSVNEYQYFLIGIAADFVTDIYRLGARKMSLSGLSPFGCLPLERTTQLFYGSKCIEEYNIVARDFNIKMEEKVFQLNRDLNGIQLVFSNPYDLVSEIIYHPEAFGFENVRSACCGTGYYEMSYLCDKMNPFTCSDASKYVFWDSFHPTEKTNAIVANHVL 343          
The following BLAST results are available for this feature:
BLAST of CX288997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
GDL44_ARATH2.978e-3341.11GDSL esterase/lipase At2g31550 OS=Arabidopsis thal... [more]
GDL56_ARATH3.293e-3239.56GDSL esterase/lipase At3g43570 OS=Arabidopsis thal... [more]
GDL5_ARATH1.807e-3039.56GDSL esterase/lipase At1g23500 OS=Arabidopsis thal... [more]
GDL41_ARATH1.807e-3038.55GDSL esterase/lipase At2g30220 OS=Arabidopsis thal... [more]
GDL23_ARATH1.807e-3038.59GDSL esterase/lipase At1g58430 OS=Arabidopsis thal... [more]
GDL48_ARATH3.082e-3033.51GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
GDL39_ARATH3.082e-3037.50GDSL esterase/lipase At2g24560 OS=Arabidopsis thal... [more]
GDL42_ARATH4.026e-3038.07GDSL esterase/lipase At2g30310 OS=Arabidopsis thal... [more]
GDL86_ARATH9.915e-2936.61GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]
GDL66_ARATH2.209e-2833.15GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC02007G12SK IF1 Citrus clementina cDNA clone C02007G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288997 ID=CX288997; Name=CX288997; organism=Citrus clementina; type=EST; length=640bp
GGTAGCAGGCAGCAATGACATAGACAATACCTATTTTGCAAGCCGCGTTA
GGAAATTGCAGTATGATATCTCTGCTTATACTGATCTTATAGTTGGACTT
GCTTCAACATTCTTCAAGGAATTATATGGACTTGGGGTGCGAAGGATGGG
AGTGTTCAGTGCACCGCCGCTTGGGTGCTTGCCGTCATCGAGAACATTGG
GTGGAGGCAAAACCAGAGATTGTGCAAACGATTACAACGAAGCAGCGCAA
ATGTTCAACACTAAATTGTCCGCAGAATTGGACTCTCTGAATATCCAATT
CCCCGATGCTAGGCTTCTTTTAATTGATATCTACAACCCTCTGCTTTATC
TCATACAAAACCCTATTAAATACGGATTTGAAGTTGTGAATAAGGGGTGC
TGCGGTACCGGAACTTTAGAGGCATCAATATTTTGTAATCAGTTCAGCCT
CAACACATGTACAAATGTGTCTGGTTATATTTTTTGGGACGGTTACCATC
CCACAGAGAGAACATATAAAATCCTCGTCTCTAGTCTCATAAACAAGATT
GCTAATGGTTTCGTTTGCGCTGGTTCTCCTTGTTGAATCTATTTGAATGA
AATATAACGGGTCAAAAAAAAAAAAAAAAAAACTCGAGGG
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