CX288997

Overview
NameCX288997
Unique NameCX288997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL31_ARATH (GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana GN=At1g74460 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.122e-19
Identity = 54/181 (29.83%), Postives = 89/181 (49.17%), Query Frame = 2
Query:    8 GSNDIDNTYFASRVR-KLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINK 547
            GSND  N Y         +Y+   + D ++    +  K L+ LG R++ VF   P+GC+P  R L      +C N  +  A+ FN   +  L  L  + P+A     + Y+ +  +I NP KYGF+  +  CC    +  ++ C   S   C + S Y+FWD YHPT++  +++ + LI +
Sbjct:  162 GSNDFINNYLMPVYSDSWKYNDQTFVDYLMETLESQLKVLHSLGARKLMVFGLGPMGCIPLQRALS--LDGNCQNKASNLAKRFNKAATTMLLDLETKLPNASYRFGEAYDLVNDVITNPKKYGFDNSDSPCCSFYRIRPALTCIPAS-TLCKDRSKYVFWDEYHPTDKANELVANILIKR 339          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL38_ARATH (GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18
Identity = 54/182 (29.67%), Postives = 87/182 (47.80%), Query Frame = 2
Query:    8 GSNDIDNTYF----ASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLI 541
            G+ND  N Y     +   R  Q       D++  L     + LY L  R+  + +  P+GC+P  +T+      +C +  N+ A  +N +L + L+ LN + P A  +  ++Y+ ++ LI N  KYGF+   K CCG G   A I     + + C     Y+FWD YHP+E    I+   L+
Sbjct:  189 GANDFLNNYLFPLLSVGTRFTQTPDDFIGDMLEHLRDQLTR-LYQLDARKFVIGNVGPIGCIPYQKTINQLDENECVDLANKLANQYNVRLKSLLEELNKKLPGAMFVHANVYDLVMELITNYDKYGFKSATKACCGNGGQYAGIIPCGPTSSLCEERDKYVFWDPYHPSEAANVIIAKQLL 369          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL37_ARATH (GDSL esterase/lipase At2g19060 OS=Arabidopsis thaliana GN=At2g19060 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18
Identity = 62/184 (33.70%), Postives = 89/184 (48.37%), Query Frame = 2
Query:    8 GSNDIDNTYF--ASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSS-RTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLN-IQFPD-ARLLLIDIYNPLLYLIQNPIKY---GFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSS 535
            GSND  N YF  A       +    Y D ++    ++ K LY LG R++ VF    LGC P    + GGGK   CA + N+A + FN KL   +   N I   D A+   +D+++      QNPI+Y   GF V +K CC   T+E+       +   C N   Y++WD  H TE   K++V +
Sbjct:  159 GSNDYLNNYFMPAPYTTNENFSFDEYADFLIQSYRSYLKSLYVLGARKVAVFGVSKLGCTPRMIASHGGGK--GCATEVNKAVEPFNKKLKDLISEFNRISVVDHAKFTFVDLFSS-----QNPIEYFILGFTVTDKSCC---TVESGQELCAANKPVCPNRERYVYWDNVHSTEAANKVVVKA 332          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.617e-18
Identity = 49/181 (27.07%), Postives = 81/181 (44.75%), Query Frame = 2
Query:    8 GSNDIDNTYFAS--RVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLIN 544
            G ND  N Y+      R  Q+ +  Y   ++       +++Y LG RR+ V    P+GC+P+       +  +CA +   AA +FN +L   +  LN +   +  +  +     +  I +P  YGF      CCG G       C   S N C N   + FWD +HP+E+  +I+   ++N
Sbjct:  167 GGNDFVNNYYLVPFSARSRQFSLPDYVVFVISEYRKVLRKMYDLGARRVLVTGTGPMGCVPAELAQRS-RNGECATELQRAASLFNPQLIQMITDLNNEVGSSAFIAANTQQMHMDFISDPQAYGFVTSKVACCGQGPYNGIGLCTPLS-NLCPNRDLFAFWDPFHPSEKASRIIAQQILN 345          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL17_ARATH (GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana GN=At1g33811 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.875e-18
Identity = 57/182 (31.32%), Postives = 81/182 (44.51%), Query Frame = 2
Query:    8 GSNDIDNTYFASRV--RKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGK---TRDCANDYNEAAQMFNTKLSAELDSLNI-QFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSS 535
            GSND  N YF          Y+   + + ++   +     LY  G R++ V     +GC+P        +   T  C    N A  +FNT++   +D LN  Q   A+ + +D Y     L  N   YGFEVV+KGCCG G     I C       C + + Y+FWD +HPTE    +L  S
Sbjct:  171 GSNDYLNNYFMPDFYSTSTNYNDKTFAESLIKNYTQQLTRLYQFGARKVIVTGVGQIGCIPYQLARYNNRNNSTGRCNEKINNAIVVFNTQVKKLVDRLNKGQLKGAKFVYLDSYKSTYDLAVNGAAYGFEVVDKGCCGVGRNNGQITCLPLQ-TPCPDRTKYLFWDAFHPTETANILLAKS 351          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.028e-17
Identity = 59/186 (31.72%), Postives = 82/186 (44.09%), Query Frame = 2
Query:    8 GSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRD---CANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTG----TLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLIN 544
            G NDI  ++  +R       +     +I  + S+  K LY  G RR  + +  PLGCLP   ++   K  D   C   YN AA +FN  L    + L  +  DA ++ IDIY     LI N  +YGF+     CCG G         I C     N C   S +I WDG H TE    I+   +++
Sbjct:  175 GQNDIARSF--ARGNSYSQTVKLIPQIITEIKSSI-KRLYDEGGRRFWIHNTGPLGCLPQKLSMVKSKDLDQHGCLVSYNSAATLFNQGLDHMCEELRTELRDATIIYIDIYAIKYSLIANSNQYGFKSPLMACCGYGGTPYNYNVKITCGHKGSNVCEEGSRFISWDGIHYTETANAIVAMKVLS 357          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL14_ARATH (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.343e-17
Identity = 51/168 (30.36%), Postives = 70/168 (41.67%), Query Frame = 2
Query:    8 GSNDIDNTYFASRVRKL--QYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPT 505
            GSND  N YF  +      QY    Y D ++         LY  G R+  +     +GC P++   G      C    N A ++FN +L + +  LN    DA    I+ Y     +I NP  YGF   N  CCG G     + C       C N   Y+FWD +HP+
Sbjct:  167 GSNDYLNNYFMPQFYSTSRQYTPEQYADDLISRYRDQLNALYNYGARKFALVGIGAIGCSPNALAQGSQDGTTCVERINSANRIFNNRLISMVQQLNNAHSDASFTYINAYGAFQDIIANPSAYGFTNTNTACCGIGRNGGQLTCLP-GEPPCLNRDEYVFWDAFHPS 333          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.754e-17
Identity = 54/185 (29.19%), Postives = 87/185 (47.03%), Query Frame = 2
Query:    2 VAGSNDIDNTY---FASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELD-SLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGT-GTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLI 541
            V GSND  N Y   F +   +L      + D ++       K LY +  R+  V +  P+GC+P  +++     + C +  N+ A  +N +L   L   L     DA  +  ++Y+  + LI N   YGF   ++ CC T G L   + C   S + CT+ S ++FWD YHPTE    ++   L+
Sbjct:  173 VIGSNDFLNNYLVPFVAAQARLTQTPETFVDDMISHLRNQLKRLYDMDARKFVVGNVAPIGCIPYQKSINQLNDKQCVDLANKLAIQYNARLKDLLTVELKDSLKDAHFVYANVYDLFMDLIVNFKDYGFRTASEACCETRGRLAGILPCGPTS-SLCTDRSKHVFWDAYHPTEAANLLIADKLL 356          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.291e-17
Identity = 51/180 (28.33%), Postives = 78/180 (43.33%), Query Frame = 2
Query:    8 GSNDIDNTYFAS--RVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLI 541
            G ND  N YF      R  Q+ +  Y  L++         L  LGV R+ V  A PLGC P+     G     C+ +   AA +++ +L   ++ LN +      +  +        +  P +YGF      CCG G       C   S N C N   Y+FWD +HPTE+  +++V  ++
Sbjct:  166 GGNDFVNNYFLFPYSARSRQFTLPDYVRLLISEYKKILLRLNSLGVGRVLVTGAGPLGCAPAELARSGTSNGRCSAELQRAASLYDPQLLQMINELNKKIGRNVFIAANTNQMQEDFLSTPRRYGFVTSKVACCGQGPYNGMGLCTVLS-NLCPNRELYVFWDAFHPTEKANRMIVRHIL 344          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.908e-17
Identity = 51/180 (28.33%), Postives = 80/180 (44.44%), Query Frame = 2
Query:    8 GSNDIDNTYFAS--RVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLI 541
            G ND  N Y+      R  QY +  Y   ++       ++LY LG RR+ V     +GC P+       +  +C      AA +FN +L   + S+N +      +  + Y   +  + NP ++GF      CCG G       C   S N C N   Y FWD +HPTE+  +I+V+ ++
Sbjct:  166 GGNDFVNNYYLIPFSARSRQYALPDYVVYLISEYGKILRKLYELGARRVLVTGTGAMGCAPAELAQHS-RNGECYGALQTAAALFNPQLVDLIASVNAEIGQDVFVAANAYQMNMDYLSNPEQFGFVTSKVACCGQGPYNGIGLCTPVS-NLCPNRDLYAFWDAFHPTEKANRIIVNQIL 343          
The following BLAST results are available for this feature:
BLAST of CX288997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
GDL31_ARATH7.122e-1929.83GDSL esterase/lipase At1g74460 OS=Arabidopsis thal... [more]
GDL38_ARATH1.215e-1829.67GDSL esterase/lipase At2g23540 OS=Arabidopsis thal... [more]
GDL37_ARATH1.215e-1833.70GDSL esterase/lipase At2g19060 OS=Arabidopsis thal... [more]
GDL79_ARATH4.617e-1827.07GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
GDL17_ARATH7.875e-1831.32GDSL esterase/lipase At1g33811 OS=Arabidopsis thal... [more]
LIP4_ARATH1.028e-1731.72GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... [more]
GDL14_ARATH1.343e-1730.36GDSL esterase/lipase At1g29660 OS=Arabidopsis thal... [more]
GDL58_ARATH1.754e-1729.19GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]
GDL77_ARATH2.291e-1728.33GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
LTL1_ARATH3.908e-1728.33GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC02007G12SK IF1 Citrus clementina cDNA clone C02007G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288997 ID=CX288997; Name=CX288997; organism=Citrus clementina; type=EST; length=640bp
GGTAGCAGGCAGCAATGACATAGACAATACCTATTTTGCAAGCCGCGTTA
GGAAATTGCAGTATGATATCTCTGCTTATACTGATCTTATAGTTGGACTT
GCTTCAACATTCTTCAAGGAATTATATGGACTTGGGGTGCGAAGGATGGG
AGTGTTCAGTGCACCGCCGCTTGGGTGCTTGCCGTCATCGAGAACATTGG
GTGGAGGCAAAACCAGAGATTGTGCAAACGATTACAACGAAGCAGCGCAA
ATGTTCAACACTAAATTGTCCGCAGAATTGGACTCTCTGAATATCCAATT
CCCCGATGCTAGGCTTCTTTTAATTGATATCTACAACCCTCTGCTTTATC
TCATACAAAACCCTATTAAATACGGATTTGAAGTTGTGAATAAGGGGTGC
TGCGGTACCGGAACTTTAGAGGCATCAATATTTTGTAATCAGTTCAGCCT
CAACACATGTACAAATGTGTCTGGTTATATTTTTTGGGACGGTTACCATC
CCACAGAGAGAACATATAAAATCCTCGTCTCTAGTCTCATAAACAAGATT
GCTAATGGTTTCGTTTGCGCTGGTTCTCCTTGTTGAATCTATTTGAATGA
AATATAACGGGTCAAAAAAAAAAAAAAAAAAACTCGAGGG
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