CX288998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_MICAN (Tryptophan synthase alpha chain OS=Microcystis aeruginosa (strain NIES-843) GN=trpA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.218e-17 Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 +AL++LD G+D+IEL VPYSDPL DGP +Q+AATR+ RG +L ++K ++ P+ FTYY PI RG+D F+ + Sbjct: 35 QALRILDRAGADLIELGVPYSDPLADGPVIQSAATRALNRGVKLEDVLEIVKNAQGEVKAPIILFTYYNPIYHRGIDVFLDQI 117
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_SYNY3 (Tryptophan synthase alpha chain OS=Synechocystis sp. (strain PCC 6803) GN=trpA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.572e-16 Identity = 39/83 (46.99%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 EAL++LD G+D+IEL VPYSDPL DGP +QAAATR+ +G + +L++++E + P+ FTYY PI +GV+ F+ + Sbjct: 35 EALRILDRAGADLIELGVPYSDPLADGPVIQAAATRALQKGVKLDDVLAIVREVHQDIAAPIILFTYYNPIFYQGVEVFLDKI 117
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_SYNP6 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=trpA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.803e-16 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 +AL LD G+D+IEL VPYSDPL DGP +QAAATR+ GT + +L++LK+ Q+ P+ FTY PIL RG + F+ + Sbjct: 35 QALLALDREGADLIELGVPYSDPLADGPVIQAAATRALQAGTRLDDVLALLKDVRSQIKAPIVLFTYCNPILNRGFEAFLDQI 117
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_SYNE7 (Tryptophan synthase alpha chain OS=Synechococcus elongatus (strain PCC 7942) GN=trpA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.803e-16 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 +AL LD G+D+IEL VPYSDPL DGP +QAAATR+ GT + +L++LK+ Q+ P+ FTY PIL RG + F+ + Sbjct: 35 QALLALDREGADLIELGVPYSDPLADGPVIQAAATRALQAGTRLDDVLALLKDVRSQIKAPIVLFTYCNPILNRGFEAFLDQI 117
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_GLOVI (Tryptophan synthase alpha chain OS=Gloeobacter violaceus GN=trpA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.331e-15 Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFM 241 EAL LD G+D++EL +PYSDPL DGP +QAAATR+ ARGT A+L ++ P++ P+ FTY+ IL G++ F+ Sbjct: 41 EALLTLDRNGADLLELGLPYSDPLADGPTIQAAATRALARGTTPGAVLDLVARLTPELRAPLIVFTYFNLILAVGIEAFV 120
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_CYAA5 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain ATCC 51142) GN=trpA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.965e-15 Identity = 37/83 (44.58%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 +AL++LD+ G+D+IEL VPYSDPL DGP +QAAA+R+ RG +L+++K + P+ F+YY PI RG++ F+ + Sbjct: 35 KALRVLDASGADLIELGVPYSDPLADGPVIQAAASRALRRGVKLEDVLNIVKGVQGDIKAPIILFSYYNPIFYRGIEAFLEQI 117
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_GRATL (Tryptophan synthase alpha chain OS=Gracilaria tenuistipitata var. liui GN=trpA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.472e-14 Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 +ALK+LD G+D+IEL +PYSD L DGP +Q A+ + +G +LS+L + +P + P+ FTYY P+L RGVD F+ + Sbjct: 33 KALKVLDREGADLIELGIPYSDALADGPIIQEASQAALKQGIYIEQVLSILTKVIPDLHAPIIIFTYYNPVLVRGVDKFICEI 115
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_PROMM (Tryptophan synthase alpha chain OS=Prochlorococcus marinus (strain MIT 9313) GN=trpA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.075e-13 Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNF 238 E L L+ G+D+IEL +PYSDPL DGP +QAAA+R+ A GT +L ML + ++ P+ FTY P+ RG++ F Sbjct: 46 EVLLSLEQSGADMIELGIPYSDPLADGPVIQAAASRALASGTTPARVLQMLIDLRGKLSIPVILFTYTNPLFNRGMERF 124
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_SYNS9 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain CC9902) GN=trpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.055e-12 Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNF 238 E L L + G+D++EL +PYSDPL DGP +QAAA R+ A GT +L ML Q+ P+ FTY P+L G++ F Sbjct: 40 EVLLSLQAAGADMVELGMPYSDPLADGPVIQAAAARALAAGTTPKKVLEMLSSLRGQLSIPVILFTYSNPLLNVGMERF 118
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_SYNPX (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain WH8102) GN=trpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.799e-12 Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNF 238 E L L + G+D++EL +PYSDPL DGP +QAAA R+ A GT +L ML Q+ P+ FTY P+L G++ F Sbjct: 40 EVLLSLQNSGADMVELGMPYSDPLADGPVIQAAAARALAAGTTPGKVLEMLTSLKGQLTIPVILFTYSNPLLNVGMEAF 118 The following BLAST results are available for this feature:
BLAST of CX288998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288998 ID=CX288998; Name=CX288998; organism=Citrus clementina; type=EST; length=267bpback to top |