CX289002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: PYRD_BACTN (Dihydroorotate dehydrogenase OS=Bacteroides thetaiotaomicron GN=pyrD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.949e-12 Identity = 53/150 (35.33%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCP+ ++ G A G + + A + K++PN+TDITE AR A SG++ VS INT++ M ID + RP + GG S AV PIAL V +AK + + + G+GG+ DA EF+L GA+ Sbjct: 126 LNISCPN---VKQGGMAFGVSAKGASEVVKAVRAAYKKTLIVKLSPNVTDITEIARAAEESGADSVSLINTLLG-MAIDAERKRPILS----TVTGGMSGAAVKPIALRMVWQVAKAV-------NIPVIGLGGIMNWKDAVEFMLAGAS 260
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: PYRD_ANATD (Dihydroorotate dehydrogenase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=pyrD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.851e-12 Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGA 449 VN SCP+ ++ G G+D + + + A+ P+ K+TPN+TDIT+ A A +G++ +S INT+ S M ID++T +P + GG S A+ PIA+ +M+ F + G+GG+ DA EF + GA Sbjct: 123 VNLSCPN---VKEGGMVFGKDPKKVYEITKSVKDVASCPIIVKLTPNVTDITQLAVAAENAGADAISLINTV-SAMAIDIETRKPLIKM----VTGGLSGPAIKPIAV-------RMVYECFKKVRIPIIGMGGIMNYKDAIEFFIAGA 256
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: PYRD_PEDPA (Dihydroorotate dehydrogenase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=pyrD PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.030e-12 Identity = 53/150 (35.33%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKA-TVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGA 449 VN SCP+ K G A G D ++E I A PV+ K+TP +T+I A A G++G+ INT+M M IDL+T +P + GG S KA+HPIA+ +M+ + + G+GGV + DA E ++ GA Sbjct: 128 VNISCPN---VAKGGLAFGTDPVVVEDMTRRIKAVVPNKPVFMKLTPGVTEIVPIALAAERGGADGLVMINTLMG-MEIDLETRKPRLS----NGTGGLSGKAIHPIAV-------RMIHQVREVTNLPIIGVGGVFSAKDALELMVAGA 262
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: PYRD_GEOSF (Dihydroorotate dehydrogenase OS=Geobacter sp. (strain FRC-32) GN=pyrD PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.030e-12 Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGA 449 VN SCP+ ++ G G D + G + + P+ K++PN+TD+ A + +G++ +S INT+ M IDL+ RP + GG S A+ P+AL V +++ M + GIGG+ + DA EF+L GA Sbjct: 128 VNISCPN---VKQGGIVFGTDPNAAAEVVGLVRRSTSKPLIIKLSPNVTDVVRMADACVNAGADALSLINTLTG-MAIDLQKRRPILA----NITGGLSGPAIKPVALRMVWQVSQAMA-------VPIIGIGGIMSATDALEFMLAGA 261
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: PYRD_FUSNN (Dihydroorotate dehydrogenase OS=Fusobacterium nucleatum subsp. nucleatum GN=pyrD PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.030e-12 Identity = 45/150 (30.00%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCP+ + G G D + + A ++VPV+ K++PN+TDI A+ G++G++ INT++ ++ +D KT +P +T GG S A+ P+A+ V +A+ + + + G+GGV D +FI GA+ Sbjct: 127 LNISCPN---VKHGGIQFGTDPNVARNLTEKVKAVSSVPVYVKLSPNVTDIVAMAKAVETGGADGLTMINTLVGIV-LDRKTGKPIIA----NTTGGLSGPAIRPVAIRMVYQVAQAV-------NIPIIGMGGVMDEWDVIDFISAGAS 261
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: PYRD_BACCL (Dihydroorotate dehydrogenase, catalytic subunit OS=Bacillus caldolyticus GN=pyrD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.569e-12 Identity = 47/150 (31.33%), Postives = 78/150 (52.00%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCP+ +K G A G + + + A VPV+ ++PN+TDI A+ +G++G++ INT++ M ID+KT RP + GG S AV PIA+ + +++ + + G+GG++T D EF GA+ Sbjct: 126 LNISCPN---VKKGGIAFGTVPDVAAELTRLVKEVAAVPVYVNVSPNVTDIVAMAKAIEQAGADGLTMINTLVG-MRIDVKTGRPILA----NGTGGLSGPAVKPIAIRMIYEVSQAV-------SIPIIGMGGIQTAEDVLEFFYAGAS 260
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: PYRDB_LACLM (Dihydroorotate dehydrogenase B, catalytic subunit OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=pyrDB PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 6.569e-12 Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCP+ + G A G D + A + VP++ K++PN+TDI A+ +G++G++ INT+M V DLKT +P + GG S A+ P+AL + +A+++ D + G+GGV D E + GA+ Sbjct: 131 LNISCPN---VKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVR-FDLKTRQPILA----NITGGLSGPAIKPVALKLIHQVAQVV-------DIPIIGMGGVANAQDVLEMYMAGAS 265
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: PYRD_PELPD (Dihydroorotate dehydrogenase OS=Pelobacter propionicus (strain DSM 2379) GN=pyrD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.579e-12 Identity = 48/150 (32.00%), Postives = 75/150 (50.00%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 VN SCP+ ++ G G D Q P+ K++PN+TD+ A+ +G++ +S INT+ M IDLK+ +P + GG S A+ P+AL V +++ ++ L GIGG+ + DA EFIL GA+ Sbjct: 127 VNISCPN---VKQGGIVFGTDPACAGQVVAACRRATKKPLIVKLSPNVTDVVVMAQACADAGADALSLINTLTG-MAIDLKSRKPVLA----NITGGLSGPAIKPVALRMVWQVSRAVQ-------VPLIGIGGITSATDALEFILAGAS 261
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: PYRD_GEOMG (Dihydroorotate dehydrogenase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pyrD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.579e-12 Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGA 449 +N SCP+ + G G + + PV K++PN+TDI E A + ++ +S INT+ M IDLK+ RP + GG S AV P+AL V +AK +K + GIGG+ +G DA EF+L GA Sbjct: 128 INISCPN---VKHGGIVFGTEPKAAYSVVKAVREATIKPVIVKLSPNVTDIVEMAWACADAEADALSLINTLTG-MAIDLKSRRPILA----NVTGGLSGPAVKPVALRMVWQVAKAVK-------IPVIGIGGIMSGTDALEFMLAGA 261
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: PYRD_BACWK (Dihydroorotate dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pyrD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.579e-12 Identity = 45/150 (30.00%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCP+ + G A G + + + + VPV+ K++PN+ +I E A+ +G++G++ INT++ M +DLKT +P + GG S A+ P+AL V +++ + + + G+GG+ET D EF GA+ Sbjct: 126 LNISCPN---VKTGGIAFGTNPEIAADLTKRVKEVSEVPVYVKLSPNVANIVEIAKAIENAGADGLTMINTLLG-MRLDLKTAKPILA----NRTGGLSGPAIKPVALRMVHEVSQAV-------NIPIIGMGGIETAEDVIEFFYAGAS 260 The following BLAST results are available for this feature:
BLAST of CX289002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289002 ID=CX289002; Name=CX289002; organism=Citrus clementina; type=EST; length=455bpback to top |