CX289006
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: YB68_SCHPO (Dynamin-like protein C12C2.08 OS=Schizosaccharomyces pombe GN=SPBC12C2.08 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.821e-38 Identity = 75/214 (35.05%), Postives = 135/214 (63.08%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQ-GALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P LAK L+ +LV HI+ LP +K+R+S+ + ++ +YG+ S Q G +LL +++++ F + ++G + + T ELSGGAR++ IF ++F +L +DP ++L+ DIRTAI N+TG ++ LF+ ++ F++L++ Q+ L P QC +Y+EL+KI H+ +++ FP L+ + E + + LRE L P+ + + +I ++ YIN Sbjct: 309 PYLAKTLSNLLVSHIRERLPDIKARLSTLISQTQQQLNNYGDFKLSDQSQRGIILLQAMNRFANTFIASIDGNSSNIPTKELSGGARLYSIFNNVFTTALNSIDPLQNLSTVDIRTAILNSTGSRATLFLSEMAFDILVKPQLNLLAAPCHQCVELVYEELMKICHYSGDSDISHFPKLQTALVETVSDLLRENLTPTYSFVESLIAIQSAYIN 522
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: VPS1_YEAST (Vacuolar protein sorting-associated protein 1 OS=Saccharomyces cerevisiae GN=VPS1 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 3.553e-34 Identity = 74/214 (34.58%), Postives = 128/214 (59.81%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVN-ELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P LAKKLN IL+ HI+ LP +K++I + L E + G T A +++L++++ +S ++ +++G+ +E+S+ ELSGGARI Y+F F ++ +DP + + D DIRT + N++G +LFV FEVL+++QI R +PSL+ ++DEL+++ + + R+P LR+ + FL++ P+ + II+ E YIN Sbjct: 317 PYLAKKLNSILLHHIRQTLPEIKAKIEATLKKYQNELINLGPETMDSAS--SVVLSMITDFSNEYAGILDGEAKELSSQELSGGARISYVFHETFKNGVDSLDPFDQIKDSDIRTIMYNSSGSAPSLFVGTEAFEVLVKQQIRRFEEPSLRLVTLVFDELVRMLKQIISQPKYSRYPALREAISNQFIQFLKDATIPTNEFVVDIIKAEQTYIN 528
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN1_HUMAN (Dynamin-1 OS=Homo sapiens GN=DNM1 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 9.057e-30 Identity = 70/214 (32.71%), Postives = 123/214 (57.48%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LPGL++++ S L+S+ KE Y + A + LL ++ +++ F +EG +++ T ELSGGARI+ IF F L +++ E +I AI+N G ++ LF PD+ FE ++++Q+ ++ +P L+C + ELI C +LQ++P LR+ M+ ++ +RE ++ + +I++E+ Y+N Sbjct: 275 PYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREPCLKCVDMVISELISTVRQC-TKKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMN 487
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN1_MOUSE (Dynamin-1 OS=Mus musculus GN=Dnm1 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.183e-29 Identity = 70/214 (32.71%), Postives = 123/214 (57.48%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LPGL++++ S L+S+ KE Y + A + LL ++ +++ F +EG +++ T ELSGGARI+ IF F L +++ E +I AI+N G ++ LF PD+ FE ++++Q+ ++ +P L+C + ELI C +LQ++P LR+ M+ ++ +RE ++ + +I++E+ Y+N Sbjct: 275 PYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVDEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREPCLKCVDMVISELISTVRQC-TKKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMN 487
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN1_RAT (Dynamin-1 OS=Rattus norvegicus GN=Dnm1 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 70/214 (32.71%), Postives = 122/214 (57.01%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LPGL++++ S L+S+ KE Y + A + LL ++ +++ F +EG +++ T ELSGGARI+ IF F L +++ E +I AI+N G ++ LF PD+ FE +++Q+ +L +PS++C + EL C +LQ++P LR+ M+ ++ +RE ++ + +I++E+ Y+N Sbjct: 275 PYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVDEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELTSTIRKC-SEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMN 487
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN1_BOVIN (Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 70/214 (32.71%), Postives = 122/214 (57.01%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LPGL++++ S L+S+ KE Y + A + LL ++ +++ F +EG +++ T ELSGGARI+ IF F L +++ E +I AI+N G ++ LF PD+ FE +++Q+ +L +PS++C + EL C +LQ++P LR+ M+ ++ +RE ++ + +I++E+ Y+N Sbjct: 275 PYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELTATIRKC-SEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMN 487
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN2_HUMAN (Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.308e-28 Identity = 70/214 (32.71%), Postives = 118/214 (55.14%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LP L+S++ S L+S+ KE Y + + LL ++ ++ F +EG +++ T ELSGGARI+ IF F L +++ E +I AI+N G ++ LF PD+ FE ++++Q+ +L +P L+C + ELI C ++L +P LR+ + ++ ++RE ++ I +I++E YIN Sbjct: 275 PHLQKTLNQQLTNHIRESLPALRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQC-TSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYIN 487
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN2_BOVIN (Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.308e-28 Identity = 70/214 (32.71%), Postives = 118/214 (55.14%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LP L+S++ S L+S+ KE Y + + LL ++ ++ F +EG +++ T ELSGGARI+ IF F L +++ E +I AI+N G ++ LF PD+ FE ++++Q+ +L +P L+C + ELI C ++L +P LR+ + ++ ++RE ++ I +I++E YIN Sbjct: 275 PHLQKTLNQQLTNHIRESLPALRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQC-TSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYIN 487
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN2_RAT (Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.231e-28 Identity = 70/214 (32.71%), Postives = 118/214 (55.14%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LP L+S++ S L+S+ KE Y + + LL ++ ++ F +EG +++ T ELSGGARI+ IF F L +++ E +I AI+N G ++ LF PD+ FE ++++Q+ +L +P L+C + ELI C ++L +P LR+ + ++ ++RE ++ I +I++E YIN Sbjct: 275 PHLQKTLNQQLTNHIRESLPTLRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELISTVRQC-TSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYIN 487
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN2_MOUSE (Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.231e-28 Identity = 70/214 (32.71%), Postives = 118/214 (55.14%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LP L+S++ S L+S+ KE Y + + LL ++ ++ F +EG +++ T ELSGGARI+ IF F L +++ E +I AI+N G ++ LF PD+ FE ++++Q+ +L +P L+C + ELI C ++L +P LR+ + ++ ++RE ++ I +I++E YIN Sbjct: 275 PHLQKTLNQQLTNHIRESLPTLRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELISTVRQC-TSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYIN 487 The following BLAST results are available for this feature:
BLAST of CX289006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289006 ID=CX289006; Name=CX289006; organism=Citrus clementina; type=EST; length=643bpback to top |