CX289006
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYNB_DICDI (Dynamin-B OS=Dictyostelium discoideum GN=dymB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.466e-27 Identity = 74/224 (33.04%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 10 LAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGE-ITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEV-----------DPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKI-SHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 LA+K N+IL +HI+ P +K++I + + YGE I A + LLL+IL+++S + + ++G NEE+ +E +GGARI YIF F + +P L+D ++ A++N+ S +F+P F+ LIR+Q+ R+ +P +Q + I DELI+I + + L RFP+L++R+ EV N LR+ ++ I +++ EM +IN Sbjct: 431 LAQKCNKILTKHIRDTFPSVKNQIRQLIKKYESDLEKYGEPIPLRSAEKSRLLLDILNEFSRKYRADLDGTNEELILNEFNGGARIRYIFSKAFQSTTAAAATTSTDNSGGGEPFGWLSDQQLKIALRNS---GSTMFIPQKIFDSLIRKQLERVREPLIQTSEIILDELIRILTQADYSHVLSRFPILKERIVEVSNNALRKLVKECNQSISQMVDAEMSFIN 651
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN1_CAEEL (Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 2.308e-25 Identity = 65/213 (30.52%), Postives = 120/213 (56.34%), Query Frame = 1 Query: 10 LAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGA-LLLNILSKYSEAFSSMVEGKNEEM-STSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 L LNQ L HI+ LP L+ + + ++ K+ A Y + G+ LL ++++++ +EG + ++ ST+ELSGGARI+ +F F + +++ E +I+ AI+N G + LF PD+ FE + ++QI RL +PSL+C + +EL + C + + R+P LR ++ ++ + +RE + ++ IG I++ E+ Y+N Sbjct: 279 LQHTLNQQLTNHIRDTLPTLRDSLQKKMFAMEKDVAEYKNYQPNDPGRKTKALLQMVTQFNADIERSIEGSSAKLVSTNELSGGARINRLFHERFPFEIVKMEIDEKEMRKEIQYAIRNIHGIRVGLFTPDMAFEAIAKKQITRLKEPSLKCVDLVVNELANVIRQC-ADTMARYPRLRDELERIVVSHMREREQIAKQQIGLIVDYELAYMN 490
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN3_HUMAN (Dynamin-3 OS=Homo sapiens GN=DNM3 PE=1 SV=4) HSP 1 Score: 115.161 bits (287), Expect = 3.015e-25 Identity = 65/214 (30.37%), Postives = 115/214 (53.74%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LP ++++ L+S+ E +Y E + LL ++ +++ F +EG +++ T ELSGGA+I+ IF F + +++ E +I AI+N G ++ LF PD+ FE ++++QI +L PSL+ + ELI C +L FP L + + ++ N +RE ++ + +I++++ YIN Sbjct: 275 PHLQKVLNQQLTNHIRDTLPNFRNKLQGQLLSIEHEVEAYKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVDTLELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVDLVIQELINTVKKC-TKKLANFPRLCEETERIVANHIREREGKTKDQVLLLIDIQVSYIN 487
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN3_RAT (Dynamin-3 OS=Rattus norvegicus GN=Dnm3 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.146e-24 Identity = 64/214 (29.91%), Postives = 114/214 (53.27%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LP ++++ L+S+ E ++ E + LL ++ +++ F +EG +++ T ELSGGA+I+ IF F + +++ E +I AI+N G ++ LF PD+ FE ++++QI +L PSL+ + ELI C L FP L + + ++ N +RE ++ + +I++++ YIN Sbjct: 275 PHLQKVLNQQLTNHIRDTLPNFRNKLQGQLLSIEHEVEAFKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVDTLELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVDLVMQELINTVKKC-TKRLANFPRLCEETERIVANHIREREGKTKDQVLLLIDIQVSYIN 487
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN3_MOUSE (Dynamin-3 OS=Mus musculus GN=Dnm3 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.146e-24 Identity = 64/214 (29.91%), Postives = 114/214 (53.27%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEIT-ESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L K LNQ L HI+ LP ++++ L+S+ E ++ E + LL ++ +++ F +EG +++ T ELSGGA+I+ IF F + +++ E +I AI+N G ++ LF PD+ FE ++++QI +L PSL+ + ELI C L FP L + + ++ N +RE ++ + +I++++ YIN Sbjct: 275 PHLQKVLNQQLTNHIRDTLPNFRNKLQGQLLSIEHEVEAFKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVDTLELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVDLVMQELINTVKKC-TKRLANFPRLCEETERIVANHIREREGKTKDQVLLLIDIQVSYIN 487
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYN_DROME (Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.186e-21 Identity = 62/215 (28.84%), Postives = 111/215 (51.63%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAG-QGALLLNILSKYSEAFSSMVEGKNEEM-STSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P L + LNQ L HI+ LPGL+ ++ ++++ KE + A + +L ++ + F +EG + +T+ELSGGA+I+ IF + ++ E +I AI+N G + LF PD+ FE +++RQIA L +P ++C + EL + C ++ R+P LR+ + +I +R+ + I +I+ E+ Y+N Sbjct: 270 PYLQRVLNQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAMLQMIQQLQSDFERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRNIHGIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTA-KMSRYPRLREETERIITTHVRQREHSCKEQILLLIDFELAYMN 483 The following BLAST results are available for this feature:
BLAST of CX289006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289006 ID=CX289006; Name=CX289006; organism=Citrus clementina; type=EST; length=643bpback to top |