CX289024

Overview
NameCX289024
Unique NameCX289024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length384
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_PENCW (Autophagy-related protein 7 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg7 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.026e-31
Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            LA  + DLNLKL++WR  P+L+L+ +   KCLLLGAGTLG  V+R L+ WGV+KIT +DNG V+ SNP+RQ L+   DCLNGG  KA  A ++L  I+P V   G  +++PM GHP+
Sbjct:  353 LADQSVDLNLKLIKWRISPTLDLEKIKHTKCLLLGAGTLGSYVSRNLLGWGVKKITFVDNGTVSFSNPVRQPLFNFQDCLNGGARKAHRASEALTEIYPGVETTGHALSVPMAGHPI 469          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_DEBHA (Autophagy-related protein 7 OS=Debaryomyces hansenii GN=ATG7 PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 5.026e-31
Identity = 64/120 (53.33%), Postives = 88/120 (73.33%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNG---GDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            LA  A DLNLKLM+WR  P+L+LDI+ +++ LLLGAGTLG  V+R LM WGVR IT +DNGR++ SNP+RQ L++  DC +    G++KA+ A  +L+ IFP V ++G  + +PM GHPV
Sbjct:  301 LAKQAVDLNLKLMKWRIAPNLDLDIIKNQRVLLLGAGTLGSYVSRALMGWGVRNITFVDNGRISYSNPVRQPLFSFKDCFSDEGQGEWKAIRAANTLKEIFPDVQSKGYNLEVPMIGHPV 420          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_ASHGO (Autophagy-related protein 7 OS=Ashbya gossypii GN=ATG7 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.026e-31
Identity = 66/117 (56.41%), Postives = 84/117 (71.79%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            LA  + DLNLKLM+WR +P +NLDI+ + K LLLGAGTLGC VAR L+AWGVRKIT +DNG V+ SNP+RQ L+   DC   G  KA +A  +++ IFP V A G  + +PM GHP+
Sbjct:  288 LAEQSIDLNLKLMKWRLVPDINLDIVKNCKVLLLGAGTLGCYVARSLLAWGVRKITFVDNGSVSYSNPVRQPLFNFTDC---GQPKATSAAAAMKAIFPLVDATGFQLEVPMIGHPL 401          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_LODEL (Autophagy-related protein 7 OS=Lodderomyces elongisporus GN=ATG7 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.574e-31
Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCL--NG-GDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEE 367
            LA  A DLNLKLM+WR  P L+LDI+  +K LLLGAGTLGC VAR L+ WGV  I  +D+GRV+ SNP+RQ L+  +DC   NG G  KA AA  +L++IFP V A+G  + +PM GHP+  +++
Sbjct:  297 LASQAVDLNLKLMKWRVAPELDLDIIKQQKVLLLGAGTLGCYVARALLGWGVCNIKFVDSGRVSYSNPVRQPLFNFEDCFSDNGRGMPKASAAANALKKIFPGVNAQGYEIEVPMIGHPITDEQK 421          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_CANGA (Autophagy-related protein 7 OS=Candida glabrata GN=ATG7 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.574e-31
Identity = 66/117 (56.41%), Postives = 84/117 (71.79%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            +A  + DLNLKLM+WR  P L+LD + + K L+LG+GTLGC  AR LMAWG R ITL+DNGRV+ SNP+RQ L+   D    G  KA+AA  SL+R+FP + A+GV + IPM GHPV
Sbjct:  293 VAEQSVDLNLKLMKWRIAPELDLDCIRNNKVLILGSGTLGCYTARSLMAWGCRNITLVDNGRVSYSNPVRQPLFEFSDV---GKEKAVAAAASLKRVFPLINAKGVQLDIPMIGHPV 406          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_PICGU (Autophagy-related protein 7 OS=Pichia guilliermondii GN=ATG7 PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 8.025e-29
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNG---GDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            LA  A DLNLKLM+WR  P LNL+ ++ +K LLLG+GTLG  VAR LM WGVR IT +DNGRV+ SNP+RQ L+  +DC +    G +KA  A ++L+ IFP V +    + +PM GHPV
Sbjct:  304 LADQAVDLNLKLMKWRISPQLNLEKVAQQKVLLLGSGTLGSYVARALMGWGVRHITFVDNGRVSYSNPVRQPLFGFNDCFSDEGLGRWKAPRAAEALKEIFPGVNSSAYNLEVPMIGHPV 423          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_KLULA (Autophagy-related protein 7 OS=Kluyveromyces lactis GN=ATG7 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.202e-28
Identity = 60/117 (51.28%), Postives = 82/117 (70.09%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            +A  + DLNLKLM+WR  P ++L+ + + K L+LG+GTLGC VAR L+AWG R +T +DN  V+ SNP+RQ L+  +DC   G  KA AA  SL++IFP+V + G  + IPM GHPV
Sbjct:  279 IAEQSIDLNLKLMKWRIAPDIDLERIKNIKALILGSGTLGCYVARALLAWGTRHVTFVDNSTVSFSNPVRQPLFNFEDC---GRPKAEAASDSLKKIFPSVVSAGYQLEIPMIGHPV 392          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_SCHPO (Autophagy-related protein 7 OS=Schizosaccharomyces pombe GN=atg7 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.872e-28
Identity = 61/117 (52.14%), Postives = 83/117 (70.94%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            L+ SA+ LNL LMRWR +P L+LD + + KCLLLGAGTLGC VAR L++WGVR +T +D   V+ SNP+RQSL+T +DC      KA  A + L+ I+P + + G  ++IPM GHP+
Sbjct:  308 LSESASTLNLSLMRWRLVPQLDLDRIQNSKCLLLGAGTLGCGVARNLLSWGVRHVTFVDYSTVSYSNPVRQSLFTFEDCKRKLP-KAECAAQRLKEIYPNMFSTGYNISIPMLGHPI 423          
The following BLAST results are available for this feature:
BLAST of CX289024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
ATG7_PENCW5.026e-3152.99Autophagy-related protein 7 OS=Penicillium chrysog... [more]
ATG7_DEBHA5.026e-3153.33Autophagy-related protein 7 OS=Debaryomyces hansen... [more]
ATG7_ASHGO5.026e-3156.41Autophagy-related protein 7 OS=Ashbya gossypii GN=... [more]
ATG7_LODEL8.574e-3153.60Autophagy-related protein 7 OS=Lodderomyces elongi... [more]
ATG7_CANGA8.574e-3156.41Autophagy-related protein 7 OS=Candida glabrata GN... [more]
ATG7_PICGU8.025e-2953.33Autophagy-related protein 7 OS=Pichia guilliermond... [more]
ATG7_KLULA5.202e-2851.28Autophagy-related protein 7 OS=Kluyveromyces lacti... [more]
ATG7_SCHPO8.872e-2852.14Autophagy-related protein 7 OS=Schizosaccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionC02008B11SK IF1 Citrus clementina cDNA clone C02008B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289024 ID=CX289024; Name=CX289024; organism=Citrus clementina; type=EST; length=384bp
GTTGGCCATATCTGCTGCAGATTTGAATTTAAAATTAATGAGATGGCGTC
AGTTGCCATCTCTGAACCTAGACATCTTATCTTCTCGGAAGTGTCTTCTC
CTAGGAGCAGGTACTCTTGGATGCCAGGTTGCTCGCATGCTTATGGCTTG
GGGTGTCCGGAAAATTACATTACTTGACAATGGCAGAGTGGCAATGTCTA
ATCCATTGAGGCAGTCGCTTTATACATTGGATGACTGCCTCAATGGTGGT
GATTTTAAAGCAATGGCAGCAGTGAAAAGCCTTGAGAGGATATTTCCAGC
CGTGGCGGCAGAAGGTGTTGTAATGGCTATACCAATGCCTGGGCATCCAG
TGCCTTGTCAAGAAGAAGATAGTGTTCTTGATGA
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