CX289037

Overview
NameCX289037
Unique NameCX289037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length384
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10223 contig Ccv1_Contig10223:407..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: CCPR2_CANAL (Putative heme-binding peroxidase OS=Candida albicans GN=CCP2 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.424e-11
Identity = 40/114 (35.09%), Postives = 57/114 (50.00%), Query Frame = 2 
Query:   44 PQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELL-----------TGEKD------GLLQLPSDKALLDDPAFRPLVE 334
            P  G LP A +  +H+R+ F  ++G +D    AL G H +GRCHK  SG+EG WTR P  F N ++  LL           TG+         L+ L +D  L+ D ++   VE
Sbjct:  149 PSNGLLPFADKDANHIRKTF-TRLGYNDQQTVALIGAHGVGRCHKRFSGWEGKWTRTPKTFSNQFYVVLLNETWSQGEVPETGKTQYFNADKSLIMLNTDMELIRDKSYLHWVE 261
The following BLAST results are available for this feature:
BLAST of CX289037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CCPR2_CANAL4.424e-1135.09Putative heme-binding peroxidase OS=Candida albica... [more]

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Properties
Property NameValue
Genbank descriptionC02008D03SK IF1 Citrus clementina cDNA clone C02008D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289037 ID=CX289037; Name=CX289037; organism=Citrus clementina; type=EST; length=384bp
CGATATCCCCTTCCACCCGGGAAGAGATGACAAGGCTGAGCCACCTCAAG
AAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGGCAAGTC
TTTGGTGCTCAGATGGGCCTCAGCGACACGGATATTGGTGCTCTCTCTGG
TGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTTGAGGGAC
CATGGACCCGCAACCCTCTCATTTTTGACAATTCCTACTTCACGGAGCTC
TTGACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCCGACAAGGCCCT
TCTGGATGACCCTGCTTTCCGCCCTCTTGTTGAGAAATATGCTGCGGATG
AGGACGCTTTCTTCGCTGATTATGCTGAGGCTCA
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