CX289039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 9.955e-24 Identity = 54/128 (42.19%), Postives = 86/128 (67.19%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAA 388 TMT +K ER I+E+GL ++++G +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+LF +L LL+SG+ ++ GPA A Sbjct: 151 TMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEA 273
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 9.955e-24 Identity = 54/128 (42.19%), Postives = 86/128 (67.19%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAA 388 TMT +K ER I+E+GL ++++G +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+LF +L LL+SG+ ++ GPA A Sbjct: 151 TMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEA 273
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.698e-23 Identity = 53/126 (42.06%), Postives = 85/126 (67.46%), Query Frame = 2 Query: 20 QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEF 397 +K ER IKE+GL ++++G +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+LF +L LL+SG+ ++ GPA A E+ Sbjct: 155 EKNERINTIIKELGLDKVADSKVGTQFTRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGKLMFHGPAQKALEY 275
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: AB21G_ARATH (ABC transporter G family member 21 OS=Arabidopsis thaliana GN=ABCG21 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.698e-23 Identity = 53/130 (40.77%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 8 MTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEF 397 +T+ +K E+ EM + ++GL N+ IGG +G+SGG+++RVSI EML P LL LDEPTSGLDS + +++ + L + G RT++T+IHQPSS ++++F + +LS G +Y G + E+ Sbjct: 188 LTRKEKLEQVEMVVSDLGLTRCCNSVIGGGLIRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAARIVATLRSLAR-----GGRTVVTTIHQPSSRLYRMFDKVLVLSEGCPIYSGDSGRVMEY 312
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: AB27G_ARATH (ABC transporter G family member 27 OS=Arabidopsis thaliana GN=ABCG27 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.218e-23 Identity = 55/131 (41.98%), Postives = 84/131 (64.12%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEF 397 T+T+ +K++RA I+E+GL+ +T IGG +G+SGG+++RV I E++T P LL LDEPTS LDS + ++ + + + +TI+T+IHQPSS +F F L +LS G +YFG AS A + Sbjct: 256 TLTEQEKEQRAASVIQELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIMTNPSLLLLDEPTSSLDSTTALKIVQMLHCIAK-----AGKTIVTTIHQPSSRLFHRFDKLVVLSRGSLLYFGKASEAMSY 381
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: AB26G_ARATH (ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.783e-23 Identity = 59/142 (41.55%), Postives = 86/142 (60.56%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMN--------TRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAAS---YYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEF 397 +M+K QK + EM IKE+GL+ + TR+GG KG+SGG+++R SI E+L P LL LDEPTSGLDS ++ +++ +AK RT+IT+IHQPSS +F +F L L+S G ++G A + E+ Sbjct: 194 SMSKEQKYAKIEMIIKELGLERFIEKHNERCRRTRVGGGFVKGISGGERKRASIAYEILVDPSLLLLDEPTSGLDSTSATKLLHILQGVAK--------AGRTVITTIHQPSSRMFHMFDKLLLISEGHPAFYGKARESMEY 327
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana GN=ABCG25 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.941e-23 Identity = 57/123 (46.34%), Postives = 81/123 (65.85%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFG 373 ++T+ K AE I E+GL NT +G +G+SGG+++RVSI E+L P LL LDEPTSGLD+ A+ ++ +A L HG G +T++TSIHQPSS VFQ+F + LLS G+ ++ G Sbjct: 172 SLTRDVKLRAAESVISELGLTKCENTVVGNTFIRGISGGERKRVSIAHELLINPSLLVLDEPTSGLDATAALRLVQTLAGL---AHGKG-KTVVTSIHQPSSRVFQMFDTVLLLSEGKCLFVG 290
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22 Identity = 50/125 (40.00%), Postives = 85/125 (68.00%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 379 T ++ Q+ +R E I E+ L+ NTR+G +G+SGG++RRVSI +++L P +L LDEPTSGLDS ++ +++ +++L + G+R ++ S+HQP S++F+LF + L++SG +Y G A Sbjct: 179 TFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAK-----GNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGAA 298
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: YO075_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YOL075C OS=Saccharomyces cerevisiae GN=YOL075C/YOL074C PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 2.452e-22 Identity = 51/115 (44.35%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 23 KKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVY 367 KK E I+E+GL+D +T +G +GLSGG+KRR+SI +M++ P ++FLDEPT+GLD+ +++ V+ + KL + D RT I SIHQP S++ L +C+LS G VY Sbjct: 157 KKLMVEQLIEELGLKDCADTLVGDNSHRGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKED----GRTFIMSIHQPRSDILFLLDQVCILSKGNVVY 267 HSP 2 Score: 96.6709 bits (239), Expect = 3.915e-20 Identity = 54/123 (43.90%), Postives = 82/123 (66.67%), Query Frame = 2 Query: 8 MTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLS-SGQTVYFG 373 +T+ ++ ER + I+ +GL+ N IG KG+SGG+KRRV++ +++L P +L LDEPTSGLDS S ++ + KL R+ G +TII +IHQP SE+F+ F N+ LL+ SG+T + G Sbjct: 805 LTEAERMERTDNLIRSLGLKHCENNIIGNEFVKGISGGEKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKL-CREQG---KTIIITIHQPRSELFKRFGNVLLLAKSGRTAFNG 923
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: ABCG8_HUMAN (ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.452e-22 Identity = 50/125 (40.00%), Postives = 84/125 (67.20%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 379 T ++ Q+ +R E I E+ L+ +TR+G +GLSGG++RRVSI +++L P +L LDEPTSGLDS ++ ++ +++L + G+R ++ S+HQP S++F+LF + L++SG +Y G A Sbjct: 178 TFSQAQRDKRVEDVIAELRLRQCADTRVGNMYVRGLSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAK-----GNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGAA 297 The following BLAST results are available for this feature:
BLAST of CX289039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289039 ID=CX289039; Name=CX289039; organism=Citrus clementina; type=EST; length=398bpback to top |