CX289039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: ABCG8_RAT (ATP-binding cassette sub-family G member 8 OS=Rattus norvegicus GN=Abcg8 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 3.203e-22 Identity = 50/125 (40.00%), Postives = 84/125 (67.20%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 379 T ++ Q+ +R E I E+ L+ NTR+G +G+SGG++RRVSI +++L P +L LDEPTSGLDS ++ ++ +++L + G+R ++ S+HQP S++F+LF + L++SG +Y G A Sbjct: 200 TFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVRTLSRLAK-----GNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGVA 319
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.203e-22 Identity = 57/132 (43.18%), Postives = 87/132 (65.91%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFG-PASAANEF 397 +++K +K ER E I ++GL++A NT IG G +G+SGG++RRVSI I+++ P +LFLDEPTSGLDS ++ V+ + ++ Q +I SIHQPS+ + +L L +LS G++V+ G PAS F Sbjct: 190 SLSKSKKMERVEALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQ-----SGSIVIMSIHQPSARIVELLDRLIILSRGKSVFNGSPASLPGFF 316
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: WHITE_LUCCU (Protein white OS=Lucilia cuprina GN=W PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.463e-22 Identity = 57/132 (43.18%), Postives = 82/132 (62.12%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWG-AKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEF 397 TMT+ QK +R + I+++ L NT IG G KGLSGG+++R++ E LT P LL DEPTSGLDS + V+ + KL QR +T+I +IHQPSSE+F+LF + L++ G+ + G A +F Sbjct: 194 TMTQKQKLQRVDQVIQDLSLIKCQNTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAASVVQVLKKLSQR-----GKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPVEAVDF 320
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: WHITE_CERCA (Protein white OS=Ceratitis capitata GN=W PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.463e-22 Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 2 Query: 8 MTKLQKKERAEMTIKEMGLQDAMNTRIGGWG-AKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEF 397 MT+ QK +R + I+++ L NT IG G KGLSGG+++R++ E LT P LL DEPTSGLDS ++ V+ + KL Q+ +T+I +IHQPSSE+F+LF + L++ G+ + G A +F Sbjct: 197 MTQKQKVQRVDQVIQDLSLGKCQNTLIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAHSVVQVLKKLSQK-----GKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPGEAVDF 322
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: ADP1_YEAST (Probable ATP-dependent permease OS=Saccharomyces cerevisiae GN=ADP1 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.217e-21 Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 23 KKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEF 397 KK R ++E+ + D + IG +G+SGG+KRRVSI E++T P +LFLDEPTSGLD++ + V+ + +L D+ +RT++ SIHQP S +F LF L LLS G+ VY G A +EF Sbjct: 501 KKARVYKVLEELRIIDIKDRIIGNEFDRGISGGEKRRVSIACELVTSPLVLFLDEPTSGLDASNANNVIECLVRLSS-DY---NRTLVLSIHQPRSNIFYLFDKLVLLSKGEMVYSGNAKKVSEF 621
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.589e-21 Identity = 58/132 (43.94%), Postives = 82/132 (62.12%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFG-PASAANEF 397 ++ K +KK R + I ++G+++A T IG G +G+SGG++RRVSI I+++ P LLFLDEPTSGLDS +++ V+ + ++ Q +I SIHQPS V L L LS G TVY G PAS F Sbjct: 199 SLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQ-----SGSIVIMSIHQPSHRVLGLLDRLIFLSRGHTVYSGSPASLPRFF 325
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.711e-21 Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEF 397 +++K +KK R + I ++GL++A T IG G +G+SGG++RRVSI +++ P +LFLDEPTSGLDS ++Y V+ + ++ Q +I SIHQPS + L L LS G TVY G + +F Sbjct: 216 SLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQ-----SGSIVIMSIHQPSYRILGLLDKLIFLSRGNTVYSGSPTHLPQF 341
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: WHT1_CAEEL (ABC transporter ATP-binding protein/permease wht-1 OS=Caenorhabditis elegans GN=wht-1 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 3.541e-21 Identity = 54/124 (43.55%), Postives = 82/124 (66.13%), Query Frame = 2 Query: 20 QKKERAEMTIKEMGLQDAMNTRIGGWGA-KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAA 388 +++ R E + +MGL+ +T IG KGLS G+K+R+S E+LT PK+LF DEPTSGLD+ + +V+ + L D+G+ T+I +IHQPSS V+ LF+N+CL++ G+ +Y GP A Sbjct: 106 ERQLRVEQVLTQMGLKKCADTVIGIPNQLKGLSCGEKKRLSFASEILTCPKILFCDEPTSGLDAFMAGHVVQALRSL--ADNGM---TVIITIHQPSSHVYSLFNNVCLMACGRVIYLGPGDQA 224
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: ABCG4_DICDI (ABC transporter G family member 4 OS=Dictyostelium discoideum GN=abcG4 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.541e-21 Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 2 Query: 8 MTKLQKKERAEMTIKEMGLQDAMNTRIGG-----WGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFG 373 MT +K R + +K++GL +N++IGG KGLSGG+K+RVSI ++T P LLFLDEPTSGLDS S VM + +L + GV T++ S+HQP E+F LF N+ ++ G+ VY G Sbjct: 324 MTDTEKDIRIKQVLKDVGLDRKLNSKIGGILPGGMIVKGLSGGEKKRVSIGCALVTNPSLLFLDEPTSGLDSLNSLKVMKVLLELTKM-KGV---TVVCSVHQPRPEIFYLFSNIMVVLKGRMVYSG 446
BLAST of CX289039 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.541e-21 Identity = 56/132 (42.42%), Postives = 85/132 (64.39%), Query Frame = 2 Query: 5 TMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFG-PASAANEF 397 ++ K +K ER E I ++GL++A +T IG G +G+SGG++RRVSI I+++ P LLFLDEPTSGLDS ++ V+ + ++ Q +I SIHQPS+ + L L +LS G++V+ G P S + F Sbjct: 182 SLPKSKKMERVETLIDQLGLRNAADTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTNAFMVVQVLKRIAQ-----SGSVVIMSIHQPSARIIGLLDRLIILSHGKSVFNGSPVSLPSFF 308 The following BLAST results are available for this feature:
BLAST of CX289039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289039 ID=CX289039; Name=CX289039; organism=Citrus clementina; type=EST; length=398bpback to top |