CX289046 | Citrus Genome Database

Overview


Name	CX289046
Unique Name	CX289046
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	521

Libraries


Library Name	Type
IF1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig15546	contig	Ccv1_Contig15546:355..875.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.354e-51
Identity = 92/131 (70.23%), Postives = 103/131 (78.63%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGE 484
            KGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELD+L+EESYKDSTLIMQLLRDNLTLWTSDI ED  +  K     + G G+
Sbjct:  132 KGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEEMKDAPKGESGDGQ 262

HSP 2 Score: 36.1946 bits (82), Expect = 6.354e-51
Identity = 14/29 (48.28%), Postives = 23/29 (79.31%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASA 89
            R K+E EL+ IC+ I+ ++D HL+PS++A
Sbjct:   93 RGKIEVELTKICDGILKLLDSHLVPSSTA 121

[Close]

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 8.285e-51
Identity = 87/120 (72.50%), Postives = 99/120 (82.50%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEFK G E+KEAA +++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG D  K
Sbjct:  126 KGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 245

HSP 2 Score: 43.1282 bits (100), Expect = 8.285e-51
Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAG 92
            R K+ESELSDIC+ I+ ++D +LIPSAS G
Sbjct:   87 RSKIESELSDICDGILKLLDSNLIPSASNG 116

[Close]

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.079e-50
Identity = 91/131 (69.47%), Postives = 102/131 (77.86%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGE 484
            KGDY+RYLAEFK GDE+K+AA ++M            DL PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELD+L EESYKDSTLIMQLLRDNLTLWTSD  +DG D  K     K  G +
Sbjct:  135 KGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGDEIKEAAAPKEPGDQ 265

HSP 2 Score: 38.5058 bits (88), Expect = 1.079e-50
Identity = 15/31 (48.39%), Postives = 24/31 (77.42%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            R K+E+EL+ IC+ I+ ++D HL+PSA A +
Sbjct:   96 RGKIEAELARICDGILALLDSHLVPSAGAAE 126

[Close]

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.080e-50
Identity = 88/124 (70.97%), Postives = 100/124 (80.65%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGT 463
            KGDY+RYLAEFK G E+KEAA +++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG D  K   T
Sbjct:  127 KGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKETKT 250

HSP 2 Score: 41.9726 bits (97), Expect = 1.080e-50
Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAG 92
            R K+ESELS+IC+ I+ ++D  LIPSASAG
Sbjct:   88 RSKIESELSNICDGILKLLDSCLIPSASAG 117

[Close]

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.407e-50
Identity = 90/120 (75.00%), Postives = 99/120 (82.50%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEFK G E+KEAA ++M            DL PTHPIRLGLALNFSVFYYEI+NSP++AC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSD+ EDG D  K
Sbjct:  126 KGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDEVK 245

HSP 2 Score: 38.891 bits (89), Expect = 1.407e-50
Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            R K+E+ELS IC+ I+ ++D HL+PS++A +
Sbjct:   87 RGKIEAELSKICDGILKLLDSHLVPSSTAAE 117

[Close]

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.408e-50
Identity = 85/120 (70.83%), Postives = 97/120 (80.83%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDYYRYLAEF  G E+KEAA  S++            L PTHP+RLGLALNFSVFYYEI+NSPE AC LAKQAFD+AI+ELD+LNEESYKDSTLIMQLLRDNLTLWTSD+ E+G++  K
Sbjct:  126 KGDYYRYLAEFSSGAERKEAADQSLEAYKAAVAAAENGLAPTHPVRLGLALNFSVFYYEILNSPESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEGDERTK 245

HSP 2 Score: 45.0542 bits (105), Expect = 1.408e-50
Identity = 18/29 (62.07%), Postives = 27/29 (93.10%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASA 89
            R++VE EL+ +CNDI++VID+HLIPS++A
Sbjct:   87 RKRVEDELAKVCNDILSVIDKHLIPSSNA 115

[Close]

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 3.116e-50
Identity = 90/114 (78.95%), Postives = 98/114 (85.96%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED 433
            KGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL+EESYKDSTLIMQLLRDNLTLWTSDI ED
Sbjct:  132 KGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISED 245

HSP 2 Score: 35.8094 bits (81), Expect = 3.116e-50
Identity = 13/29 (44.83%), Postives = 24/29 (82.76%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASA 89
            R K+E+EL+ IC+ I+ +++ HL+PS++A
Sbjct:   93 RGKIETELTKICDGILKLLESHLVPSSTA 121

[Close]

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.117e-50
Identity = 87/120 (72.50%), Postives = 99/120 (82.50%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEFK G E+K+AA +++            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG D  K
Sbjct:  131 KGDYHRYLAEFKSGAERKDAAESTLTAYKSAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 250

HSP 2 Score: 40.817 bits (94), Expect = 3.117e-50
Identity = 17/30 (56.67%), Postives = 24/30 (80.00%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAG 92
            R K+E+ELS+ICN I+ ++D  LIPSA+ G
Sbjct:   92 RSKIETELSNICNGILKLLDSRLIPSAALG 121

[Close]

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 4.061e-50
Identity = 84/120 (70.00%), Postives = 100/120 (83.33%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEF  GD +++A  +S++           +LPPTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSDI E G++ Q+
Sbjct:  127 KGDYHRYLAEFSSGDAREKATNSSLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDISESGQEDQQ 246

HSP 2 Score: 41.5874 bits (96), Expect = 4.061e-50
Identity = 17/31 (54.84%), Postives = 26/31 (83.87%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            R K+E+EL+ I +DI++V+D HLIPSA+ G+
Sbjct:   88 RSKIETELTKISDDILSVLDSHLIPSATTGE 118

[Close]

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 4.062e-50
Identity = 91/131 (69.47%), Postives = 101/131 (77.10%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGE 484
            KGDY+RYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSD  E+G D  K     +  G E
Sbjct:  130 KGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAAAKRESGEE 260

HSP 2 Score: 38.891 bits (89), Expect = 4.062e-50
Identity = 16/31 (51.61%), Postives = 24/31 (77.42%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            R K+E+ELS IC+ I+ +++ HLIPSAS  +
Sbjct:   91 RGKIETELSKICDGILNLLESHLIPSASTAE 121

The following BLAST results are available for this feature:

BLAST of CX289046 vs. ExPASy Swiss-Prot

BLAST of CX289046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
1433B_HORVU	6.354e-51	70.23	14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1	[more]
14332_SOLLC	8.285e-51	72.50	14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P...	[more]
14334_ORYSJ	1.079e-50	69.47	14-3-3-like protein GF14-D OS=Oryza sativa subsp. ...	[more]
1433B_TOBAC	1.080e-50	70.97	14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV...	[more]
14333_ORYSJ	1.407e-50	75.00	14-3-3-like protein GF14-C OS=Oryza sativa subsp. ...	[more]
14310_ARATH	1.408e-50	70.83	14-3-3-like protein GF14 epsilon OS=Arabidopsis th...	[more]
14332_ORYSJ	3.116e-50	78.95	14-3-3-like protein GF14-B OS=Oryza sativa subsp. ...	[more]
1433A_VICFA	3.117e-50	72.50	14-3-3-like protein A OS=Vicia faba PE=2 SV=1	[more]
BMH2_YEAST	4.061e-50	70.00	Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P...	[more]
1433_MESCR	4.062e-50	69.47	14-3-3-like protein OS=Mesembryanthemum crystallin...	[more]

Pages

Properties


Property Name	Value
Genbank description	C02008E03SK IF1 Citrus clementina cDNA clone C02008E03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX289046 ID=CX289046; Name=CX289046; organism=Citrus clementina; type=EST; length=521bp
ATAGGCAAAAGGTTGAATCTGAATTGTCGGACATTTGCAATGATATCATG
ACTGTCATTGATGAGCATCTTATTCCTTCAGCAAGTGCTGGAAAGGAGAT
TATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAGAGGC
TGCTGCTAATTCAATGAAAGCGTATGAGACAGCTACCACTGCTGCAGAGG
CTGATTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAATTTC
TCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCCATCT
TGCAAAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTCAACG
AGGAGTCCTACAAAGACAGCACCTTAATTATGCAGCTTCTTAGGGACAAC
CTTACCTTATGGACTTCTGACATTCCAGAAGATGGAGAAGATGCCCAGAA
GGCTAATGGCACTGCCAAAGTTGGTGGGGGAGAAGATGCAGAGGTAGGTT
TTCTCTTTTAAATGCTATTAT