CX289055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO12_ORYSJ (Protein argonaute 12 OS=Oryza sativa subsp. japonica GN=AGO12 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 3.175e-30 Identity = 68/118 (57.63%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GI+GTSRP HYHVL DEN F AD LQ+LT NL YTYARCTR+VSIVPPAYYAHL AFRAR+YME E SD + +PLP +KENVKR MFYC Sbjct: 949 GIKGTSRPTHYHVLLDENGFKADTLQTLTYNLSYTYARCTRAVSIVPPAYYAHLGAFRARYYMEDEHSDQ-----------------GSSSSVTTRTDRSTKPLPEIKENVKRFMFYC 1049
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO11_ORYSJ (Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.276e-28 Identity = 66/122 (54.10%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME----PETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GIQGTS P HY+VL+DEN F+AD LQ+LT +LCYTYARCTRSVSIVPP YYAHLAA RAR Y+E P+ S G V+PLP +KENVK+ MFYC Sbjct: 785 GIQGTSHPTHYYVLFDENNFSADALQTLTYHLCYTYARCTRSVSIVPPVYYAHLAASRARHYLEEGSLPDHGSSSASAAGGSRRNDR--------------GVPVKPLPEIKENVKQFMFYC 892
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO7_ORYSJ (Protein argonaute 7 OS=Oryza sativa subsp. japonica GN=AGO7 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.249e-26 Identity = 60/118 (50.85%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 G +GTSRP HYHVLWDEN F +D +Q L +NLCYT+ARCTR VS+VPPAYYAHLAA+R R Y+ E SD+ PLP L++NVKR+MFYC Sbjct: 954 GTKGTSRPTHYHVLWDENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAYYAHLAAYRGRLYL--ERSDTTMYRVSPLQTV---------------------PLPKLRDNVKRLMFYC 1048
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO3_MOUSE (Protein argonaute-3 OS=Mus musculus GN=Eif2c3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.292e-23 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 210 GIQGTSRP+HYHVLWD+N FTAD LQ LT LC+TY RCTRSVSI PAYYAHL AFRAR+++ + DS Sbjct: 756 GIQGTSRPSHYHVLWDDNFFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDS 825
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO3_HUMAN (Protein argonaute-3 OS=Homo sapiens GN=EIF2C3 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.292e-23 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 210 GIQGTSRP+HYHVLWD+N FTAD LQ LT LC+TY RCTRSVSI PAYYAHL AFRAR+++ + DS Sbjct: 756 GIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDS 825
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO3_CHICK (Protein argonaute-3 OS=Gallus gallus GN=EIF2C3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.292e-23 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 210 GIQGTSRP+HYHVLWD+N FTAD LQ LT LC+TY RCTRSVSI PAYYAHL AFRAR+++ + DS Sbjct: 756 GIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDS 825
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO2_XENTR (Protein argonaute-2 OS=Xenopus tropicalis GN=eif2c2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23 Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 210 GIQGTSRP+HYHVLWD+N+F++D LQ LT LC+TY RCTRSVSI PAYYAHL AFRAR+++ + DS Sbjct: 767 GIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDS 836
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO2_XENLA (Protein argonaute-2 OS=Xenopus laevis GN=eif2c2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23 Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 210 GIQGTSRP+HYHVLWD+N+F++D LQ LT LC+TY RCTRSVSI PAYYAHL AFRAR+++ + DS Sbjct: 758 GIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDS 827
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO2_RAT (Protein argonaute-2 OS=Rattus norvegicus GN=Eif2c2 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23 Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 210 GIQGTSRP+HYHVLWD+N+F++D LQ LT LC+TY RCTRSVSI PAYYAHL AFRAR+++ + DS Sbjct: 756 GIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDS 825
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO2_RABIT (Protein argonaute-2 (Fragment) OS=Oryctolagus cuniculus GN=EIF2C2 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23 Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 210 GIQGTSRP+HYHVLWD+N+F++D LQ LT LC+TY RCTRSVSI PAYYAHL AFRAR+++ + DS Sbjct: 736 GIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDS 805 The following BLAST results are available for this feature:
BLAST of CX289055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289055 ID=CX289055; Name=CX289055; organism=Citrus clementina; type=EST; length=506bpback to top |