CX289058

Overview
NameCX289058
Unique NameCX289058
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.617e-41
Identity = 89/168 (52.98%), Postives = 110/168 (65.48%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 506
            H++ +C  VTERVLAA YKA+ DHHV LEGTLLKPNMVTPG   P K + + +A  TV AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  197 HNLKRCQFVTERVLAAVYKAMFDHHVYLEGTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.291e-40
Identity = 93/168 (55.36%), Postives = 115/168 (68.45%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTP-DVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 506
            H I  CA VT++VLA+ +KAL+D+ VLLEG  LKPNMVT G +  + T  D I   TVR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  193 HTIEVCATVTQKVLASVFKALHDNGVLLEGASLKPNMVTAGYDCTEKTKTDDIGFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.485e-39
Identity = 87/168 (51.79%), Postives = 113/168 (67.26%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 506
            H I++  DV E+V A  +  L  ++V+ EG LLKP+MVTPG+EA  + TP+ +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  235 HGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.309e-39
Identity = 85/168 (50.60%), Postives = 112/168 (66.67%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 506
            HDI++  DV E+V A  +  L  ++V+ EG LLKP+MVTPG+E+  + TP+ +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV  AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  234 HDIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 398          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.145e-38
Identity = 82/168 (48.81%), Postives = 116/168 (69.05%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 506
            H I++  +V ++V A  +  + +++V+ EG LLKP+MVTPG+E   + TP+ ++++T++ L R +P AVP ++FLSGGQSE EAT+NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  224 HGIDRTFEVAQKVWAETFFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.240e-38
Identity = 85/168 (50.60%), Postives = 112/168 (66.67%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 506
            H I++  +V ++V A  +  L +++V  EG LLKP+MVTPG+E+  K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E A + L VK Y Y
Sbjct:  192 HGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGE-SEEAKKELFVKGYSY 356          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.045e-37
Identity = 81/168 (48.21%), Postives = 111/168 (66.07%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 506
            H I +  +V E+V +  +  L  ++V+ EG LLKP+MVTPG+E   K +P+ +A+ T+  L+R +P AVP ++FLSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ S L+ W GK E ++ +Q A LVR KANS A LG Y  + +  E A + + VK Y Y
Sbjct:  227 HPIERTLEVAEKVWSEVFFYLAQNNVMFEGILLKPSMVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQ--SPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGE-NEDAKKGMFVKGYTY 391          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.301e-35
Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 467
            H I++  +V ++V A  +  L +++V  EG LLKP+MVTPG+E+  K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  186 HGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.031e-32
Identity = 72/137 (52.55%), Postives = 91/137 (66.42%), Query Frame = 3
Query:   99 LLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 506
            LLKPNMVTPG   P K +P+ IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:    1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.000e-32
Identity = 72/147 (48.98%), Postives = 93/147 (63.27%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY 443
            HDI  C  V++ V +    AL+ H V+ EG LLKPNMV PG+E+  K   + +AE+TV+ L R +P A+P V FLSGG SE  A+  LNAMN     +PW L+FS+ RALQ S +K W GKE  V+  + AF+ R K NS A LG Y
Sbjct:  207 HDIETCQRVSQHVWSEVVSALHRHGVVWEGCLLKPNMVVPGAESGLKGHAEQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKY 353          
The following BLAST results are available for this feature:
BLAST of CX289058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDCA_DANRE4.617e-4152.98Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF2_PLABA2.291e-4055.36Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALFC1_ARATH1.485e-3951.79Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC2_ARATH3.309e-3950.60Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC_ORYSJ2.145e-3848.81Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_PEA6.240e-3850.60Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC3_ARATH4.045e-3748.21Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC2_PEA1.301e-3550.97Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALDOC_CHICK1.031e-3252.55Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALF_TRYBB3.000e-3248.98Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]

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Properties
Property NameValue
Genbank descriptionC02008F03SK IF1 Citrus clementina cDNA clone C02008F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289058 ID=CX289058; Name=CX289058; organism=Citrus clementina; type=EST; length=616bp
GTCCCCATGACATCAACAAGTGTGCTGATGTGACCGAGCGTGTTCTTGCT
GCATGCTACAAGGCTCTGAATGACCACCATGTCCTTCTTGAGGGTACCCT
TTTGAAGCCCAACATGGTGACCCCTGGATCTGAAGCTCCCAAAGTTACAC
CGGACGTGATTGCTGAACACACTGTCCGGGCCCTGCAACGCACTATGCCT
GCAGCAGTTCCTGCTGTTGTGTTCTTGTCTGGTGGGCAGAGTGAGGAGGA
GGCTACCCGCAACCTTAATGCCATGAACCAGCTCAAGACGAAGAAGCCAT
GGTCACTTTCCTTCTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCAAG
GCATGGGCTGGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTGCTTTCCT
TGTCAGGTGCAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGGGTG
ATGCCCAGCTTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGACTAC
AAATACTAAGCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTTTAT
GAGAGTAAATGGCGGTATGAACATTAGGTTGGCCCATTCTCATTCATAGT
TTTAGAGCTTTTTCAT
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