CX289058

Overview
NameCX289058
Unique NameCX289058
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.150e-30
Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 449
            HDI+   +VTE  L + + AL + +V+LEGT+LK +MV PG++  +  + D +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQL    PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  186 HDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQL-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.808e-30
Identity = 66/100 (66.00%), Postives = 77/100 (77.00%), Query Frame = 3
Query:   75 HHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 371
            H++ LEGTLLKPNMVT G   PK  TP+ IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.255e-30
Identity = 70/150 (46.67%), Postives = 99/150 (66.00%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 449
            HDI+   +VTE  L + + AL + +V+LEGT+LK +MV PG++  +  + D +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  186 HDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.377e-29
Identity = 74/168 (44.05%), Postives = 103/168 (61.31%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 506
            HDI++C +V E + A  +K + D+ V+L+G LLKP MVTPG++   K  P  +AE+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  + A   R KANS+A  G Y    + G+ AA+ ++ K   Y
Sbjct:  210 HDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAP-PVPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.054e-29
Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 449
            HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G    +  + + +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  186 HDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.541e-28
Identity = 69/150 (46.00%), Postives = 96/150 (64.00%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 449
            HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G    +  + + +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  186 HDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 7.156e-26
Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGS-EAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 467
            H I++   V ++V A  +  L +++VLLEG+ LKP+MV PG+  A K  P+ +A++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV+    A     K+NS A LG Y G+ +  E
Sbjct:  232 HGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEE 381          
BLAST of CX289058 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.382e-21
Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = 3
Query:    6 HDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 401
            + + +  +VT ++L+   K LN   V + G L+K + VT G  +  K TP  +A  T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ   L
Sbjct:  188 YSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CX289058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF1_XYLFA2.150e-3047.33Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_LYMST2.808e-3066.00Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALF1_XYLFT6.255e-3046.67Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE2.377e-2944.05Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_XANAC4.054e-2946.67Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP1.541e-2846.00Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_SPIOL7.156e-2643.87Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF_ENCCU2.382e-2139.85Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionC02008F03SK IF1 Citrus clementina cDNA clone C02008F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289058 ID=CX289058; Name=CX289058; organism=Citrus clementina; type=EST; length=616bp
GTCCCCATGACATCAACAAGTGTGCTGATGTGACCGAGCGTGTTCTTGCT
GCATGCTACAAGGCTCTGAATGACCACCATGTCCTTCTTGAGGGTACCCT
TTTGAAGCCCAACATGGTGACCCCTGGATCTGAAGCTCCCAAAGTTACAC
CGGACGTGATTGCTGAACACACTGTCCGGGCCCTGCAACGCACTATGCCT
GCAGCAGTTCCTGCTGTTGTGTTCTTGTCTGGTGGGCAGAGTGAGGAGGA
GGCTACCCGCAACCTTAATGCCATGAACCAGCTCAAGACGAAGAAGCCAT
GGTCACTTTCCTTCTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCAAG
GCATGGGCTGGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTGCTTTCCT
TGTCAGGTGCAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGGGTG
ATGCCCAGCTTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGACTAC
AAATACTAAGCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTTTAT
GAGAGTAAATGGCGGTATGAACATTAGGTTGGCCCATTCTCATTCATAGT
TTTAGAGCTTTTTCAT
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