CX289068

Overview
NameCX289068
Unique NameCX289068
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length561
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig884 contig Ccv1_Contig884:39..599. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289068 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.945e-41
Identity = 82/177 (46.33%), Postives = 121/177 (68.36%), Query Frame = 2
Query:   20 YAFEVALGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSLDDVDGSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSELKETIIEGGVPFDRVHGTNAFEYLGLDPRFNEVFSTAMSNHTTLVLQKILEAYKGFE 550
            +A ++A  SVL M +K+ I L L EII   G    +S +EIA+ LP T N DAP M+DRIL LL+ Y +V CS+  VD   R+YGL  V KY   NQDGVS+  +  + QDK  ++SW  LK+ +++GG+PF++ +G ++FEY G DPRFN+VF+  MS+H+T+ ++K+ + Y+GF+
Sbjct:    3 FAMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTT-NPDAPAMVDRILRLLSCYSVVTCSVRSVD-DQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQ 175          
BLAST of CX289068 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 8.568e-41
Identity = 88/185 (47.57%), Postives = 123/185 (66.49%), Query Frame = 2
Query:    5 DENFAYAFEVALGSVLHMTMKAVINLGLFEIIAKA-GPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSLDDVDGS--HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSELKETIIEGGVPFDRVHGTNAFEYLGLDPRFNEVFSTAMSNHTTLVLQKILEAYKGFE 550
            +E   +A ++A  +VL M +KA I L + EI+AK+  P   +S +EIAAQLP T N +AP MLDR+L LLASY +V  +L ++      RLYGL  V K+   N+DGVSL P L    DK  L+ W  LK+ I+EGG+PF++ +G N F+Y G D RFN+VF+  MS+++T+ ++KILE Y GFE
Sbjct:   19 EEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTT-NPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFE 202          
BLAST of CX289068 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.600e-39
Identity = 79/189 (41.80%), Postives = 120/189 (63.49%), Query Frame = 2
Query:    5 DENFAYAFEVALGSVLHMTMKAVINLGLFEIIAKAGPGAK--LSASEIAAQLPATKNKDAPT--MLDRILGLLASYGIVECSLDDVDGSH-RLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSELKETIIEGGVPFDRVHGTNAFEYLGLDPRFNEVFSTAMSNHTTLVLQKILEAYKGFEHI 556
            +E   YA ++A  S+L MT+K  I LGL E++ K   G K  L+  E+ A++PA  +  A    M+DR+L LLASY +V C ++D DG + R Y    V K+  PN+DGVS+  +  + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G D RFN VF+  M NH+ ++ +K+L+ Y GFE +
Sbjct:   14 EEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGV 202          
BLAST of CX289068 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.512e-37
Identity = 78/190 (41.05%), Postives = 118/190 (62.11%), Query Frame = 2
Query:    5 DENFAYAFEVALGSVLHMTMKAVINLGLFEIIAKA------GPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSLDD-VDGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSELKETIIEGGVPFDRVHGTNAFEYLGLDPRFNEVFSTAMSNHTTLVLQKILEAYKGFE 550
            +E   YA ++A  S+L MT+K  I LGL E +  A      G  A L+ +E+A +LP+  N  A  M+DR+L LLASY +V C +++  DG   R Y    V K+  PN+DGVS+  +  + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G D RFN VF+  M NH+ ++ +K+L+ Y GF+
Sbjct:   14 EEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFD 203          
BLAST of CX289068 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.400e-37
Identity = 82/188 (43.62%), Postives = 116/188 (61.70%), Query Frame = 2
Query:    2 RDENFA-YAFEVALGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSLDDVDG-SHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSELKETIIEGGVPFDRVHGTNAFEYLGLDPRFNEVFSTAMSNHTTLVLQKILEAYKGFEHIK 559
            +DE  A  A  +A  +   M +K+   L + +I +KAG G  +S SEIA+Q+ A KN +AP +LDR+L LLAS+ ++ C L   +G S R+YG   +  Y   N    SLGP+L L  DK  ++SW  L + I+EGGVPF R HG   F+Y G D RFN VF+  M++HT LV++K+L+ Y GF  +K
Sbjct:   17 KDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGA-KNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVK 203          
BLAST of CX289068 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.712e-31
Identity = 72/171 (42.11%), Postives = 111/171 (64.91%), Query Frame = 2
Query:   50 LHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSLDDVDGSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSELKETIIEGGV-PFDRVHGTNAFEYLGLDPRFNEVFSTAMSNHTTLVLQKILEAYKGFEHIK 559
            L M ++A I L +FEII++AGP A+LS S+I A++P TKN  A   LDRIL +L +  I+  S      S R+YGLN+ S+  V ++D VS+ P+L    DKA ++S+  +K+ ++E GV PFDR HG + F+Y G + R N+ F+ AM   +T+   ++ + YKGF+++K
Sbjct:   51 LPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIP-TKNPSAAISLDRILRMLGASSILSVSTTK---SGRVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLK 217          
BLAST of CX289068 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.049e-26
Identity = 67/170 (39.41%), Postives = 103/170 (60.59%), Query Frame = 2
Query:   62 MKAVINLGLFEIIAKAGP-GAKLSASEIAAQLPA-TKNKDAPTMLDRILGLLASYGIVECSLDDVD--GSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSELKETIIEGGVP-FDRVHGTNAFEYLGLDPRFNEVFSTAMSNHTTLVLQKILEAYKGFEHI 556
            + A I+L LFEIIAKA P GA +S SEIA++LPA T++ D P  LDR+L LLASY ++  +   ++  G+ R+YGL+ V KY VP++    L      +   A L  W   KE +++  +  F  VHG   +E++G D + N++F+ +M +     ++++LE Y GFE I
Sbjct:   41 LNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGI 210          
BLAST of CX289068 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.289e-12
Identity = 55/176 (31.25%), Postives = 92/176 (52.27%), Query Frame = 2
Query:   11 NFAYAFEVALGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATK-NKDAPTMLDRILGLLASYGIVECSLDDVDGSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSELKETII-EGGVPFDRVHGTNAFEYLGLDPRFNEVFSTAMSNHTTLVLQKILE 532
            NF Y F  +L       +K  + L L  II  +G    ++ SE++++LP+   N+DA   L R++  L    +   +   +DG  R YGL   +KY V   D   +G +LA I DK F+  W  LK+ +  E G  F++  GTN + Y+   P  N++F+ AM+N + L++  +++
Sbjct:   16 NFIYGFAESL------VLKCAVQLDLANIIHNSG--TSMTLSELSSRLPSQPVNEDA---LYRVMRYLVHMKLFTKA--SIDGELR-YGLAPPAKYLVKGWDKCMVGSILA-ITDKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVK 176          
The following BLAST results are available for this feature:
BLAST of CX289068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
OMT2_CHRAE2.945e-4146.33Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
IEMT_CLABR8.568e-4147.57(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_MAIZE3.600e-3941.80Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ1.512e-3741.05Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
IMT1_MESCR4.400e-3743.62Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
SMT_COPJA4.712e-3142.11(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA2.049e-2639.41Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
6OMT_COPJA1.289e-1231.25(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]

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Properties
Property NameValue
Genbank descriptionC02008G03SK IF1 Citrus clementina cDNA clone C02008G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289068 ID=CX289068; Name=CX289068; organism=Citrus clementina; type=EST; length=561bp
GAGAGACGAAAACTTTGCATATGCCTTTGAAGTGGCGTTGGGTTCAGTGC
TCCACATGACCATGAAAGCAGTAATTAATCTGGGACTTTTCGAGATCATA
GCCAAAGCTGGTCCTGGAGCAAAGCTCTCAGCTTCAGAGATTGCCGCTCA
GTTGCCCGCCACGAAGAACAAAGACGCACCCACGATGCTGGACCGGATAC
TCGGGCTTCTGGCTAGCTATGGCATTGTTGAATGCTCACTTGATGATGTC
GATGGTTCTCACAGGCTATACGGTTTGAATGATGTTTCCAAATACTTTGT
GCCTAATCAAGATGGTGTCTCATTAGGCCCTGTATTGGCCTTAATTCAGG
ACAAGGCCTTTCTCGACAGCTGGTCCGAACTGAAAGAAACTATTATTGAA
GGAGGAGTTCCATTTGACCGAGTCCACGGAACGAACGCTTTCGAGTACCT
AGGATTGGACCCCAGGTTCAATGAAGTTTTCAGCACAGCGATGTCCAACC
ATACCACTTTGGTCCTTCAGAAAATCCTTGAGGCTTACAAGGGTTTCGAG
CACATAAAGCA
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