CX289069

Overview
NameCX289069
Unique NameCX289069
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length540
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11659 contig Ccv1_Contig11659:636..1175. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289069 vs. ExPASy Swiss-Prot
Match: INT4_ARATH (Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.962e-13
Identity = 51/161 (31.68%), Postives = 77/161 (47.83%), Query Frame = 2
Query:   11 VFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLPAVGALAMPESPRWLVMQGRLADAKKVLDK--TSDSKEESMLRLADIKEAAGIPEDCNDDVVQVPKINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITS 487
            + I GG    Y+ N  F   P    WR MLG+  +P+++  V  L++PESPRWL  + R+A+++ +L++   +D  E  M  L    EA    E    D     K+    G          P VR  + A + +   QQ  GI++V+ YSP I + AG  S
Sbjct:  163 LLITGGQFFSYLINLAFVHTPGT--WRWMLGVAGVPAIVQFVLMLSLPESPRWLYRKDRIAESRAILERIYPADEVEAEMEALKLSVEAEKADEAIIGDSFSA-KLKGAFG---------NPVVRRGLAAGITVQVAQQFVGINTVMYYSPSIVQFAGYAS 311          
BLAST of CX289069 vs. ExPASy Swiss-Prot
Match: QAY_NEUCR (Quinate permease OS=Neurospora crassa GN=qa-y PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.608e-12
Identity = 53/171 (30.99%), Postives = 76/171 (44.44%), Query Frame = 2
Query:   26 GILLGYVSNYGFSKL--PLHLGWRMMLGIGAIPSVLPAVGALAMPESPRWLVMQGRLADAKKVLDKTSDSKEESMLRLADIKEAAGIPEDCNDDVVQVPKINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVK 532
            G L+G+  NYG +    P    W +   +  IP+ L  +G+  +PESPRWL   G+  +A KVL    + +         ++E + I  D      QV     G G WK  L      V+        + F+Q  SGI+++  YSP +F   GIT  D   L T   G VK
Sbjct:  172 GGLVGFWINYGVNTTMAPTRSQWLIPFAVQLIPAGLLFLGSFWIPESPRWLYANGKREEAMKVLCWIRNLEPTDRY---IVQEVSFIDADLERYTRQV-----GNGFWKPFLSLKQRKVQWRFFLGGMLFFWQNGSGINAINYYSPTVFRSIGITGTDTGFLTTGIFGVVK 334          
BLAST of CX289069 vs. ExPASy Swiss-Prot
Match: QAY_NEUAF (Quinate permease OS=Neurospora africana GN=qa-y PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.608e-12
Identity = 53/171 (30.99%), Postives = 77/171 (45.03%), Query Frame = 2
Query:   26 GILLGYVSNYGFSKL--PLHLGWRMMLGIGAIPSVLPAVGALAMPESPRWLVMQGRLADAKKVLDKTSDSKEESMLRLADIKEAAGIPEDCNDDVVQVPKINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVK 532
            G L+G+  NYG +    P    W +   +  IP+ L  +G+  +PESPRWL   GR  +A KVL    + +         ++E + I  D      +V     G+G WK  L    P VR        +  +Q  SGI+++  YSP +F   GIT  +   L T   G VK
Sbjct:  172 GGLVGFWINYGVNTTMAPTRSQWLIPFAVQLIPAGLLFLGSFWIPESPRWLFANGRREEAIKVLCWIRNLEPTDRYI---VEEISYIDADLQRYAREV-----GKGFWKPFLSLKQPKVRWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVK 334          
BLAST of CX289069 vs. ExPASy Swiss-Prot
Match: STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.406e-12
Identity = 45/163 (27.61%), Postives = 80/163 (49.08%), Query Frame = 2
Query:   26 GILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLPAVGALAMPESPRWLVMQGRLADAKKVLDKTSDSKEESMLRLADIKEAAGIPEDCNDDVVQVPKINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATV 514
            GIL+  + NY   ++    GWR+ LG+  +P++L  +G L +PE+P  LV QG+L  AK VL K              ++    I  +  D V         +  ++ LL R       +++ A+G+  FQQ +G++S++ Y+P +F+  G       + +T+
Sbjct:  184 GILVANLINYKTEQIH-PWGWRLSLGLATVPAILMFLGGLVLPETPNSLVEQGKLEKAKAVLIK--------------VRGTNNIEAEFQDLVEASDAARAVKNPFRNLLARRNRP--QLVIGAIGLPAFQQLTGMNSILFYAPVMFQSLGFGGSASLISSTI 329          
BLAST of CX289069 vs. ExPASy Swiss-Prot
Match: HUP1_CHLKE (H(+)/hexose cotransporter 1 OS=Chlorella kessleri GN=HUP1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12
Identity = 53/176 (30.11%), Postives = 85/176 (48.30%), Query Frame = 2
Query:    8 EVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLPAVGALAMPESPRWLVMQGRLADAKKVLDKTSDSKEESMLRLADIKEAAGIPEDCNDDVVQVPKINRGEGVWKELLVRPTPAVRHI--IVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFV 529
            ++F+  GIL+  + NY         GWR+ LG  A P  +  +G+L +PESP +LV +G+    ++VL K   + E      ADI  A           V++ +       W  L  R     R++  ++ +  I FFQQ +GI++++ Y P +F   G ++    LL TV VG V
Sbjct:  179 QLFVTIGILIAGLVNYAVRDW--ENGWRLSLGPAAAPGAILFLGSLVLPESPNFLVEKGKTEKGREVLQKLCGTSEVD-AEFADIVAA-----------VEIARPITMRQSWASLFTR-----RYMPQLLTSFVIQFFQQFTGINAIIFYVPVLFSSLG-SANSAALLNTVVVGAV 334          
BLAST of CX289069 vs. ExPASy Swiss-Prot
Match: HXT5_YEAST (Probable glucose transporter HXT5 OS=Saccharomyces cerevisiae GN=HXT5 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12
Identity = 47/176 (26.70%), Postives = 81/176 (46.02%), Query Frame = 2
Query:    8 EVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLPAVGALAMPESPRWLVMQGRLADAKKVLDKTSDSKEESMLRLADIKEAAGIPEDCNDDVVQVPKINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKT 535
            ++ I  GI LGY +N+G       + WR+ LG+    S+   VG   +PESPR+LV  G++ +AK+ L + + + E+S L   +++             ++  ++  G   W EL+       R  ++  + I   QQ +G +    Y   IF+  G+    E  +    V FV T
Sbjct:  230 QLMITFGIFLGYCTNFGTKNYSNSVQWRVPLGLCFAWSIFMIVGMTFVPESPRYLVEVGKIEEAKRSLARANKTTEDSPLVTLEMEN--------YQSSIEAERL-AGSASWGELVTGKPQMFRRTLMGMM-IQSLQQLTGDNYFFYYGTTIFQAVGLEDSFETAIVLGVVNFVST 395          
BLAST of CX289069 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12
Identity = 48/169 (28.40%), Postives = 84/169 (49.70%), Query Frame = 2
Query:   26 GILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLPAVGALAMPESPRWLVMQGRLADAKKVLDKTSDSKEESMLRLADIKEAAGIPEDCNDDVVQVPKINRG-EGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFV 529
            G L   + NYG  K+    GWR+ L + A+P+ +   GAL +PE+P  L+ +             S+  E + L L  ++    +  +  DD+++   I+R  +  +K ++ R     R  +V AV I FFQQ +GI+ +  Y+P +F   G+  +   LL+++  G V
Sbjct:  180 GALSANLINYGTEKIEGGWGWRISLAMAAVPAAILTFGALFLPETPNSLIQR-------------SNDHERAKLMLQRVRGTTDVQAEL-DDLIKASIISRTIQHPFKNIMRR---KYRPQLVMAVAIPFFQQVTGINVIAFYAPILFRTIGL-EESASLLSSIVTGLV 330          
BLAST of CX289069 vs. ExPASy Swiss-Prot
Match: YNCC_BACSU (Putative metabolite transport protein yncC OS=Bacillus subtilis GN=yncC PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.690e-11
Identity = 47/176 (26.70%), Postives = 88/176 (50.00%), Query Frame = 2
Query:    8 EVFINGGILLGYVSNYGFSKLPLHLG--WRMMLGIGAIPSVLPAVGALAMPESPRWLVMQGRLADAKKVLDKTSDSKEESMLRLADIKEAAGIPEDCNDDVVQVPKINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFV 529
            E+ I GG  L YV N        + G  WR ML I A+P+++     L +PESPRWL+ +G+ ++A +VL +  + K  +     +I+EA  + +D   +   +   +             TP +R ++   +G+    Q +G++S++ Y  +I +++G  +K   L+A +  G +
Sbjct:  145 ELMIVGGQFLAYVFNAILGVTMANTGHVWRYMLVICAVPAIMLFASMLKVPESPRWLISKGKNSEALRVLKQIREDK-RAEAECREIQEA--VEKDTALEKASLKDFS-------------TPWLRRLLWIGIGVAIVNQITGVNSIMYYGTQILKESGFGTK-AALIANIGNGLI 303          
BLAST of CX289069 vs. ExPASy Swiss-Prot
Match: HXT10_YEAST (Hexose transporter HXT10 OS=Saccharomyces cerevisiae GN=HXT10 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.690e-11
Identity = 50/180 (27.78%), Postives = 82/180 (45.56%), Query Frame = 2
Query:    2 FPEVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLPAVGALAMPESPRWLVMQGRLADAKKVLDKTSDSKEESMLRLADIKEAAGIPEDCNDDVVQVPKINR--GEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKT 535
            F ++ I  GI LGY +NYG  K    + WR+ LG+    ++   +G + +PESPR+LV +G+  +A++ L K++            + +   + E   D +V   ++ R  G   W EL       +  +I+  V I   QQ +G +    Y   IF   G+    E  +   AV F  T
Sbjct:  191 FYQLMITLGIFLGYCTNYGTKKYSNSIQWRVPLGLCFAWAIFMVIGMVMVPESPRYLVEKGKYEEARRSLAKSNK---------VTVTDPGVVFE--FDTIVANMELERAVGNASWHELFSNKGAILPRVIMGIV-IQSLQQLTGCNYFFYYGTTIFNAVGMQDSFETSIVLGAVNFAST 358          
BLAST of CX289069 vs. ExPASy Swiss-Prot
Match: GTR12_HUMAN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.690e-11
Identity = 53/175 (30.29%), Postives = 82/175 (46.86%), Query Frame = 2
Query:    8 EVFINGGILLGYVSNYGFSKLPLHLGWRMMLGIGAIPSVLPAVGALAMPESPRWLVMQGRLADAKKVLDKTSDSKEESMLRLADIKEAAGIPEDCNDDVVQVPKINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVK 532
            E+ I  GIL  Y+SNY F+ +  H GW+ M G+     VL A+    +P SPR+LVM+G+   A KVL +        +  L+D  E   + +    D  Q          W   L R    +R  I+  + + FF Q +G  +++ Y+  + +  G  S +   LA+  VG VK
Sbjct:  172 ELMIVIGILSAYISNYAFANV-FH-GWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVMKGQEGAASKVLGR--------LRALSDTTEELTVIKSSLKDEYQY-------SFWD--LFRSKDNMRTRIMIGLTLVFFVQITGQPNILFYASTVLKSVGFQSNEAASLASTGVGVVK 327          
The following BLAST results are available for this feature:
BLAST of CX289069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
INT4_ARATH8.962e-1331.68Inositol transporter 4 OS=Arabidopsis thaliana GN=... [more]
QAY_NEUCR2.608e-1230.99Quinate permease OS=Neurospora crassa GN=qa-y PE=3... [more]
QAY_NEUAF2.608e-1230.99Quinate permease OS=Neurospora africana GN=qa-y PE... [more]
STP14_ARATH3.406e-1227.61Sugar transport protein 14 OS=Arabidopsis thaliana... [more]
HUP1_CHLKE7.587e-1230.11H(+)/hexose cotransporter 1 OS=Chlorella kessleri ... [more]
HXT5_YEAST9.909e-1226.70Probable glucose transporter HXT5 OS=Saccharomyces... [more]
HEX6_RICCO9.909e-1228.40Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]
YNCC_BACSU1.690e-1126.70Putative metabolite transport protein yncC OS=Baci... [more]
HXT10_YEAST1.690e-1127.78Hexose transporter HXT10 OS=Saccharomyces cerevisi... [more]
GTR12_HUMAN1.690e-1130.29Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionC02008G04SK IF1 Citrus clementina cDNA clone C02008G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289069 ID=CX289069; Name=CX289069; organism=Citrus clementina; type=EST; length=540bp
ATTTCCTGAGGTTTTCATTAACGGCGGGATATTACTTGGCTACGTCTCGA
ACTACGGATTCTCCAAACTACCCCTCCACTTAGGCTGGCGCATGATGCTC
GGAATCGGCGCCATTCCGTCGGTGCTTCCCGCCGTCGGCGCGTTAGCCAT
GCCAGAATCTCCGCGCTGGCTGGTGATGCAAGGCCGACTCGCCGATGCAA
AGAAAGTTCTCGACAAAACCTCGGACTCGAAAGAGGAGTCTATGCTCAGA
CTCGCCGATATCAAAGAAGCAGCCGGCATTCCTGAAGACTGCAACGACGA
CGTCGTTCAAGTGCCGAAAATCAACCGTGGCGAAGGCGTATGGAAAGAGC
TGCTGGTCCGTCCTACACCGGCCGTTCGTCACATCATAGTCGCAGCCGTT
GGTATTCATTTCTTCCAACAAGCATCCGGCATAGACTCTGTCGTTCTTTA
CAGTCCTAGAATCTTTGAAAAAGCTGGGATTACGTCAAAAGACGAAAAGT
TACTCGCTACTGTAGCCGTTGGATTTGTCAAGACCACTTT
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