CX289070

Overview
NameCX289070
Unique NameCX289070
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length501
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10837 contig Ccv1_Contig10837:55..555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.189e-21
Identity = 51/106 (48.11%), Postives = 73/106 (68.87%), Query Frame = 1
Query:   97 RKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +KMP+IGLG+      +  +K+AV  A+ +GYRH D A++YG E  +GEA+ E +  G    REELF+T+KLW +  H + V  AL+K+L  LQ+EY+DLYL+HWP
Sbjct:   12 QKMPLIGLGTWKSEPGQ--VKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP 115          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.553e-21
Identity = 56/137 (40.88%), Postives = 85/137 (62.04%), Query Frame = 1
Query:   97 RKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLV--PLDYNGVWEA 501
            +KMP+IGLG+      +  +K AV  A+ +GYRH D A +YG E  +GEAI E++       REE+F+T+KLW +  H D V  AL+K+L+ LQ++Y+DLYL+HWP + K  +++    P+  +     DY   W+A
Sbjct:   14 QKMPLIGLGTWKSAPGQ--VKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGPDKGLKREEVFVTSKLWNNKHHPDDVECALRKTLQELQLDYLDLYLMHWPYAFKRGDQVFPQNPDGSVQYDLTDYKDTWKA 148          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.553e-21
Identity = 51/106 (48.11%), Postives = 73/106 (68.87%), Query Frame = 1
Query:   97 RKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +KMP+IGLG+      +  +K+AV  A+ +GYRH D A++YG E  +GEA+ E +  G    REELF+T+KLW +  H + V  AL+K+L  LQ+EY+DLYL+HWP
Sbjct:   12 QKMPLIGLGTWKSEPGQ--VKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALQKTLADLQLEYLDLYLMHWP 115          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1CL_RAT (Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus GN=Akr1c21 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.649e-21
Identity = 51/113 (45.13%), Postives = 76/113 (67.26%), Query Frame = 1
Query:  103 MPVIGLGSAVDN-IDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEK 438
            +PV+G G+A+ + + +   K     AI  G+ HFD+A +Y TE  +GEAI E +  G    RE++F T+KLWC+  H +LV  +L+ SLK LQ++YVDLYLIH+PM+ KP ++
Sbjct:   16 IPVLGFGTAMPSELPKSKAKEVTKIAIDAGFHHFDSAFVYNTEDHVGEAIREKIANG-TTRREDIFYTSKLWCTSLHPELVRSSLECSLKKLQLDYVDLYLIHFPMALKPGDE 127          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 4.519e-21
Identity = 51/113 (45.13%), Postives = 75/113 (66.37%), Query Frame = 1
Query:  103 MPVIGLGSAVD-NIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEK 438
            +PV+G G+A+     +   K     AI  G+ HFD+AS+Y TE  +GEAI   +  G V  RE++F T+K+WC+  H +LV  +L++SL+ LQ +YVDLYLIH+PM+ KP E+
Sbjct:   16 IPVLGFGTALPLECPKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVR-REDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPGEE 127          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.519e-21
Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKL----GYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNG 489
            MPV+G G+          KS  LEA KL    G+RH D+A LY  E  +G AI   +  G V  RE++F T+KLWC+    +LV  AL++SLK LQ++YVDLYLIH+P+S KP          E+++P D NG
Sbjct:   16 MPVLGFGTYAP---AEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSV-KREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG---------EEVIPKDENG 135          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: YBN4_SCHPO (Uncharacterized oxidoreductase C8E4.04 OS=Schizosaccharomyces pombe GN=SPBC8E4.04 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.902e-21
Identity = 56/136 (41.18%), Postives = 80/136 (58.82%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMS--AKPSEKLRNDIPEEDLVPLDYNGVWEA 501
            K+P IGLG+     DE   K+AV  A+K GYRH DTA +YG E+ +GE I E+        R ++++T+KLWC+     LV  AL+K+L+ L +EY+D YLIHWP +  + P E  RN+  E     +     W+A
Sbjct:   22 KIPSIGLGTWRSGKDET--KNAVCAALKAGYRHIDTAHIYGNEKEIGEGIRES-----GVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEELPRNEKGELIYEDVPIEETWQA 150          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AKCL2_RAT (1,5-anhydro-D-fructose reductase OS=Rattus norvegicus GN=Akr1e2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.902e-21
Identity = 56/119 (47.06%), Postives = 75/119 (63.03%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIP 456
            ++P +GLG+   +  E  +  AV  AI LGYRHFD A LY  E  +G  I E +K G+V  R+ELFI +KLWC+   + LV  A   +L+ L ++Y+DLYLIHWPM  KP +K   DIP
Sbjct:    3 QIPTVGLGTWKASPGE--VTDAVKVAINLGYRHFDCAYLYHNESEVGMGIKEKIKEGVV-KRDELFIVSKLWCTYHKQSLVKTACINTLEALNLDYLDLYLIHWPMGFKPGDK---DIP 115          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1C1_PONAB (Aldo-keto reductase family 1 member C1 homolog OS=Pongo abelii GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.902e-21
Identity = 58/133 (43.61%), Postives = 79/133 (59.40%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKL----GYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNG 489
            MPV+G G+          KS  LEA KL    G+RH D+A LY  E  +G AI   +  G V  RE++F T+KLWC+    +LV  AL++SLK LQ++YVDLYL+H+P+S KP          E+++P D NG
Sbjct:   16 MPVLGFGTYAP---PEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSV-KREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLVHFPVSVKPG---------EEVIPKDENG 135          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 56/139 (40.29%), Postives = 86/139 (61.87%), Query Frame = 1
Query:  103 MPVIGLGS-AVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNGV-----WEA 501
            +PV+G G+ A + + +     A   AI++G+RH D+A LY  E  +G+AI   +  G V  RE++F T+KLWC+    +LV  AL+KSL+ LQ++YVDLY+IH P+S KP  K    +P+++   L ++ V     WEA
Sbjct:   16 IPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTV-KREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGNKF---VPKDESGKLIFDSVDLCHTWEA 150          
The following BLAST results are available for this feature:
BLAST of CX289070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
AK1A1_HUMAN1.189e-2148.11Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]
AK1A1_XENLA1.553e-2140.88Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
AK1A1_PONAB1.553e-2148.11Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]
AK1CL_RAT2.649e-2145.13Aldo-keto reductase family 1 member C21 OS=Rattus ... [more]
AK1CL_MOUSE4.519e-2145.13Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]
AK1C1_HUMAN4.519e-2144.36Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]
YBN4_SCHPO5.902e-2141.18Uncharacterized oxidoreductase C8E4.04 OS=Schizosa... [more]
AKCL2_RAT5.902e-2147.061,5-anhydro-D-fructose reductase OS=Rattus norvegi... [more]
AK1C1_PONAB5.902e-2143.61Aldo-keto reductase family 1 member C1 homolog OS=... [more]
PGFS2_BOVIN7.709e-2140.29Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC02008G05SK IF1 Citrus clementina cDNA clone C02008G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289070 ID=CX289070; Name=CX289070; organism=Citrus clementina; type=EST; length=501bp
AAACAAACGAACAGGATCAACATGGCTGCGAATTCCGAACCGATGCATGT
ATCCATCAACGTCCCAGAAGTAAAGCTCAGCTCCGCCTCCGGTCACCGGA
AGATGCCGGTGATCGGACTGGGCTCGGCGGTGGACAACATAGATGAAAGG
GCCATGAAATCAGCAGTACTGGAAGCGATCAAGCTCGGTTACAGACACTT
CGACACAGCTTCGCTGTACGGAACAGAGAGGGCCCTGGGAGAAGCAATAG
CTGAAGCACTTAAACTTGGGCTTGTCGCATCTCGCGAAGAGCTCTTCATT
ACTACTAAGCTCTGGTGCAGCGACGCTCATCGTGATCTCGTTGTACGCGC
TCTGAAGAAGTCTCTTAAGACGCTTCAGATTGAATATGTTGACCTGTACC
TCATTCATTGGCCAATGAGTGCTAAGCCGAGTGAGAAATTACGAAACGAT
ATACCCGAAGAAGATCTTGTACCACTGGACTACAACGGTGTGTGGGAAGC
C
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