CX289070

Overview
NameCX289070
Unique NameCX289070
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length501
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y1984_MYCSK (Uncharacterized oxidoreductase Mkms_1984 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1984 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.840e-15
Identity = 49/118 (41.53%), Postives = 72/118 (61.02%), Query Frame = 1
Query:   61 VPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +P V L+   GH  +PV+GLG  V  + E   + +V  A++ GYR  DTA++YG E A+G A+  +   G+   REE+++TTKL  +D        A + SL+ L ++YVDLYLIHWP
Sbjct:   11 IPSVSLND--GH-SIPVLGLG--VGELSEAEAERSVAAALEAGYRLIDTAAVYGNEAAVGRAVNAS---GI--PREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWP 118          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y1938_MYCSS (Uncharacterized oxidoreductase Mmcs_1938 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_1938 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.840e-15
Identity = 49/118 (41.53%), Postives = 72/118 (61.02%), Query Frame = 1
Query:   61 VPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +P V L+   GH  +PV+GLG  V  + E   + +V  A++ GYR  DTA++YG E A+G A+  +   G+   REE+++TTKL  +D        A + SL+ L ++YVDLYLIHWP
Sbjct:   11 IPSVSLND--GH-SIPVLGLG--VGELSEAEAERSVAAALEAGYRLIDTAAVYGNEAAVGRAVNAS---GI--PREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWP 118          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y1918_MYCSJ (Uncharacterized oxidoreductase Mjls_1918 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1918 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.840e-15
Identity = 49/118 (41.53%), Postives = 72/118 (61.02%), Query Frame = 1
Query:   61 VPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +P V L+   GH  +PV+GLG  V  + E   + +V  A++ GYR  DTA++YG E A+G A+  +   G+   REE+++TTKL  +D        A + SL+ L ++YVDLYLIHWP
Sbjct:   11 IPSVSLND--GH-SIPVLGLG--VGELSESEAERSVAAALEAGYRLIDTAAVYGNEAAVGRAVNAS---GI--PREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWP 118          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: MORA_PSEPU (Morphine 6-dehydrogenase OS=Pseudomonas putida GN=morA PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 6.321e-15
Identity = 50/125 (40.00%), Postives = 67/125 (53.60%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP--------MSAKPSEKLRND 450
            KMP +GLG    + +E A  SA+  AI  GYR  DTA  Y  E  +GE I  +        R E+F+TTKL+  D   +  +RA  +SL  L ++YVDLYL+HWP         S K +EK+  D
Sbjct:   15 KMPALGLGVFAASAEETA--SAIASAISSGYRLIDTARSYNNEAQVGEGIRNS-----GVDRAEMFVTTKLFNCDYGYERALRAFDESLGRLGLDYVDLYLLHWPTKDWNATIQSWKAAEKILGD 132          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1D1_RABIT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagus cuniculus GN=AKR1D1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.321e-15
Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 1
Query:   82 SASGHR-------KMPVIGLG--SAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNGVW 495
            SA+ HR        +P+IGLG  S      + +  ++V  AI  GYRH D A +Y  E  +GE   E +  G V  RE++F   KLW ++    +V   L+++LK L+++Y+DLY+I  PM+ KP +          + P D NG W
Sbjct:    4 SATNHRIPLGDGNSIPIIGLGTYSEPKTTPKGSCATSVKIAIDTGYRHIDGAYIYQNEHEVGETFREKIAEGKVR-REDIFYCGKLWATNHDPVMVRPTLERTLKVLKLDYIDLYIIEIPMAFKPGDV---------VYPRDENGKW 140          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y3816_MYCA1 (Uncharacterized oxidoreductase MAV_3816 OS=Mycobacterium avium (strain 104) GN=MAV_3816 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 8.255e-15
Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSA 423
            MPV+GLG A  + DE   + AV  A+++G R  DTA+ YG E A+G AIA +   G+   R ELF+TTKL  SD      + A + SL+ L ++YVDLYLIHWP  A
Sbjct:   23 MPVLGLGVAELSDDET--ERAVSAALEVGCRLIDTAAAYGNEAAVGRAIAAS---GI--PRAELFVTTKLATSDQGFKGAMDACEASLERLGLDYVDLYLIHWPAPA 122          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y3007_MYCPA (Uncharacterized oxidoreductase MAP_3007 OS=Mycobacterium paratuberculosis GN=MAP_3007 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.255e-15
Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSA 423
            MPV+GLG A  + DE   + AV  A+++G R  DTA+ YG E A+G AIA +   G+   R ELF+TTKL  SD      + A + SL+ L ++YVDLYLIHWP  A
Sbjct:   20 MPVLGLGVAELSDDET--ERAVSAALEVGCRLIDTAAAYGNEAAVGRAIAAS---GI--PRAELFVTTKLATSDQGFKGAMDACEASLERLGLDYVDLYLIHWPAPA 119          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.255e-15
Identity = 51/107 (47.66%), Postives = 64/107 (59.81%), Query Frame = 1
Query:  100 KMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRAL-KKSLKTLQIEYVDLYLIHWPM 417
            KMP+ G G     ID +  +  V +AIK GYR FD A  YG E  +G  I +A+  GLV  RE+LFI TKLW +  H    VRAL  + LK   +EY DLYLIH+P+
Sbjct:   14 KMPIRGFGCW--KIDTKDCEETVYQAIKTGYRLFDGACDYGNEVEVGRGINKAINEGLV-KREDLFIVTKLW-NTFHSKKHVRALFDRQLKDTGLEYFDLYLIHFPV 116          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1
Query:   64 PEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPM 417
            P + L+  +    +P +GLG  V        + AV  A++ GYRH DTA+ Y  E   G AIA +        RE++F+ TKLW SD   D  + A   S++ L ++Y+DLYLIHWP+
Sbjct:    3 PRITLNDGNS---IPQVGLG--VWQTPAEDTERAVAAALQAGYRHIDTAAAYRNETETGRAIANS-----GVPREDIFLVTKLWNSDQGYDATLAAFDASVQRLGVDYLDLYLIHWPV 110          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAK 426
            +P +GLG  V        + AV  A+  GYRH DTA+ YG E   G AIA++   GL   R ++++ TKLW S+   D  + A + S+  L ++Y+DLYLIHWP+  K
Sbjct:   14 IPQVGLG--VWQTPPEDTERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQS---GL--DRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEK 114          
The following BLAST results are available for this feature:
BLAST of CX289070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
Y1984_MYCSK4.840e-1541.53Uncharacterized oxidoreductase Mkms_1984 OS=Mycoba... [more]
Y1938_MYCSS4.840e-1541.53Uncharacterized oxidoreductase Mmcs_1938 OS=Mycoba... [more]
Y1918_MYCSJ4.840e-1541.53Uncharacterized oxidoreductase Mjls_1918 OS=Mycoba... [more]
MORA_PSEPU6.321e-1540.00Morphine 6-dehydrogenase OS=Pseudomonas putida GN=... [more]
AK1D1_RABIT6.321e-1534.693-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagu... [more]
Y3816_MYCA18.255e-1547.66Uncharacterized oxidoreductase MAV_3816 OS=Mycobac... [more]
Y3007_MYCPA8.255e-1547.66Uncharacterized oxidoreductase MAP_3007 OS=Mycobac... [more]
DTDH_MUCMU8.255e-1547.664-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]
Y2408_MYCS21.078e-1438.14Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]
Y1985_MYCSK1.078e-1440.74Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionC02008G05SK IF1 Citrus clementina cDNA clone C02008G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289070 ID=CX289070; Name=CX289070; organism=Citrus clementina; type=EST; length=501bp
AAACAAACGAACAGGATCAACATGGCTGCGAATTCCGAACCGATGCATGT
ATCCATCAACGTCCCAGAAGTAAAGCTCAGCTCCGCCTCCGGTCACCGGA
AGATGCCGGTGATCGGACTGGGCTCGGCGGTGGACAACATAGATGAAAGG
GCCATGAAATCAGCAGTACTGGAAGCGATCAAGCTCGGTTACAGACACTT
CGACACAGCTTCGCTGTACGGAACAGAGAGGGCCCTGGGAGAAGCAATAG
CTGAAGCACTTAAACTTGGGCTTGTCGCATCTCGCGAAGAGCTCTTCATT
ACTACTAAGCTCTGGTGCAGCGACGCTCATCGTGATCTCGTTGTACGCGC
TCTGAAGAAGTCTCTTAAGACGCTTCAGATTGAATATGTTGACCTGTACC
TCATTCATTGGCCAATGAGTGCTAAGCCGAGTGAGAAATTACGAAACGAT
ATACCCGAAGAAGATCTTGTACCACTGGACTACAACGGTGTGTGGGAAGC
C
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